RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 B8ZZF3 427 aa16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 ZSCAN9O15535 394 aaPredicted RBP16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 CTSBP07858 339 aa16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 CUL1Q13616 776 aa16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 COL9A2Q14055 689 aaPredicted RBP16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 FASTKQ14296 549 aaKnown RBP16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 NAA25Q14CX7 972 aa16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 DEFB109BQ30KR1 87 aa16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 ZC3H12BQ5HYM0 836 aaKnown RBP16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 ZNF572Q7Z3I7 529 aaPredicted RBP16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 MAATS1Q7Z4T9 603 aa16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 TAX1BP1Q86VP1 789 aa16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 MCATQ8IVS2 390 aaKnown RBP16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 BBOF1Q8ND07 529 aa16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 PROKR1Q8TCW9 393 aa16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 GBP5Q96PP8 586 aa16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 PKP4Q99569 1192 aa16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 TAS2R13Q9NYV9 303 aa16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 WHRNQ9P202 907 aa16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 CORO1CQ9ULV4 474 aaPredicted RBP16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 CHMP2BQ9UQN3 213 aa16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 KLHL20Q9Y2M5 609 aa16.52■□□□□ 0.24
SFSWAP-205ENST00000537164 ANKRD12Q6UB98 2062 aa16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 ZNF839A8K0R7 811 aa16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 SLC16A8O95907 504 aa16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 PSMB5P28074 263 aa16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 CARSP49589 748 aaKnown RBP16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 RPS18P62269 152 aaKnown RBP16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 KCNAB2Q13303 367 aa16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 TRMT10BQ6PF06 316 aaKnown RBP16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 SYT10Q6XYQ8 523 aa16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 APLFQ8IW19 511 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 LRRC56Q8IYG6 542 aaPredicted RBP16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 CPNE9Q8IYJ1 553 aa16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 ENDOVQ8N8Q3 282 aaKnown RBP16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 ADAMTS17Q8TE56 1095 aa16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 ZNF480Q8WV37 535 aa16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 THAP4Q8WY91 577 aa16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 SMPDL3AQ92484 453 aa16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 C17orf62Q9BQA9 187 aa16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 DHRS4Q9BTZ2 278 aa16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 TRIM31Q9BZY9 425 aa16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 SLC25A18Q9H1K4 315 aa16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 MOCS1Q9NZB8 636 aa16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 TRMT6Q9UJA5 497 aaKnown RBP16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 TSR3Q9UJK0 312 aaKnown RBP16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 TCFL5Q9UL49 500 aa16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 SNX24Q9Y343 169 aa16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 CCDC88CQ9P219 2028 aa16.51■□□□□ 0.23
SFSWAP-205ENST00000537164 MDC1Q14676 2089 aaKnown RBP16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 OR2A25A4D2G3 310 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 FITM1A5D6W6 292 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 E7ENX8 843 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 ZBTB14O43829 449 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 SRPX2O60687 465 aaPredicted RBP16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 CTSVO60911 334 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 ONECUT2O95948 504 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 AGXTP21549 392 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 PNLIPRP1P54315 467 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 CDKN2DP55273 166 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 TAP2Q03519 686 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 NCF4Q15080 339 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 PTCHD3Q3KNS1 767 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 TCTE1Q5JU00 501 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 HP1BP3Q5SSJ5 553 aaPredicted RBP16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 RBM20Q5T481 1227 aaKnown RBP16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 YOD1Q5VVQ6 348 aaPredicted RBP16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 DUPD1Q68J44 220 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 ZNF655Q8N720 491 aaPredicted RBP16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 FBXO36Q8NEA4 188 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 CFAP36Q96G28 342 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 NDNQ99608 321 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 MIPEPQ99797 713 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 SLC7A5P2Q9GIP4 190 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 ANKMY1Q9P2S6 941 aa16.5■□□□□ 0.23
SFSWAP-205ENST00000537164 CDC14CA4D256 554 aa16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 RAD51CO43502 376 aa16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 KLF7O75840 302 aaPredicted RBP16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 CD63P08962 238 aa16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 MCM3P25205 808 aa16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 CMPK1P30085 196 aa16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 RGS4P49798 205 aa16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 PMS2P54278 862 aa16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 ARSFP54793 590 aa16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 RELAQ04206 551 aa16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 PRDX1Q06830 199 aaKnown RBP16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 PDIA2Q13087 525 aaKnown RBP16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 SP140Q13342 867 aa16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 IL10RAQ13651 578 aa16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 FASTKD3Q14CZ7 662 aaKnown RBP16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 PAQR3Q6TCH7 311 aa16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 RNF44Q7L0R7 432 aa16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 PIWIL4Q7Z3Z4 852 aaKnown RBP16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 SPNS2Q8IVW8 549 aa16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 EEF1AKMT1Q8WVE0 214 aa16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 DLG3Q92796 817 aa16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 NDC1Q9BTX1 674 aa16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 PHACTR1Q9C0D0 580 aa16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 PPANQ9NQ55 473 aaKnown RBP16.49■□□□□ 0.23
SFSWAP-205ENST00000537164 GRHL1Q9NZI5 618 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms