RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 TUBB4BP68371 445 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 IRF9Q00978 393 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 ACY1Q03154 408 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 SRSF6Q13247 344 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 CLN3Q13286 438 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 SLC29A2Q14542 456 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 IL11RAQ14626 422 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 TSNQ15631 228 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 SF1Q15637 639 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 ERCC6LQ2NKX8 1250 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 TMEM164Q5U3C3 297 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 PRAMEF17Q5VTA0 474 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 PWWP2BQ6NUJ5 590 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 CEACAM20Q6UY09 585 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 TIPARPQ7Z3E1 657 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 SYTL1Q8IYJ3 562 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 CENPLQ8N0S6 344 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 DNAJC22Q8N4W6 341 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 ZNF248Q8NDW4 579 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 ANKRD7Q92527 254 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 PTERQ96BW5 349 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 TCTN2Q96GX1 697 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 CCDC138Q96M89 665 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 ASPSCR1Q9BZE9 553 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 CHRNA10Q9GZZ6 450 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 ATG10Q9H0Y0 220 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 PDE7BQ9NP56 450 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 SNX15Q9NRS6 342 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 ARL15Q9NXU5 204 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 UTP6Q9NYH9 597 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 TAC3Q9UHF0 121 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 PILRAQ9UKJ1 303 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 RARRES3Q9UL19 164 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 NOVA2Q9UNW9 492 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 SH2B3Q9UQQ2 575 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 PCDHB11Q9Y5F2 797 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 KLK4Q9Y5K2 254 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 URB1O60287 2271 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 ACACAQ13085 2346 aa10.89□□□□□ -0.67
TNFRSF1A-208ENST00000536194 A0A087WV48 116 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 TMEM150CB9EJG8 249 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 CTSVO60911 334 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 STK17BO94768 372 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 GUCA1CO95843 209 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 INHBAP08476 426 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 ENO2P09104 434 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 ITPKBP27987 946 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 HSD17B2P37059 387 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 MAGEA12P43365 314 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 KCNC1P48547 511 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 AP1S2P56377 157 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 TSTA3Q13630 321 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 COL9A2Q14055 689 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 CSHL1Q14406 222 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 NAA30Q147X3 362 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 OR4D1Q15615 310 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 TMTC4Q5T4D3 741 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 FIGLAQ6QHK4 219 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 AGTRAPQ6RW13 159 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 PPP1R3BQ86XI6 285 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 SPACA3Q8IXA5 215 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 OR1L3Q8NH93 324 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 KCNE4Q8WWG9 221 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 ISL2Q96A47 359 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 FBXL8Q96CD0 374 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 FCRL4Q96PJ5 515 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 ZPBPQ9BS86 351 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 SGPP1Q9BX95 441 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 ULBP3Q9BZM4 244 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 SYNPO2LQ9H987 977 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 IGSF5Q9NSI5 407 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 ABCF3Q9NUQ8 709 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 CTNNAL1Q9UBT7 734 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 ZNF180Q9UJW8 692 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 SSUH2Q9Y2M2 353 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 TMEM184BQ9Y519 407 aaPredicted RBP10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 OARD1Q9Y530 152 aa10.88□□□□□ -0.67
TNFRSF1A-208ENST00000536194 EXOC1LA0A1B0GW35 172 aa10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 OR2A25A4D2G3 310 aa10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 ZNF839A8K0R7 811 aa10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 STMND1H3BQB6 276 aa10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 KIAA0754O94854 1291 aa10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 FKBP9O95302 570 aa10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 SHBGP04278 402 aa10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 C2P06681 752 aa10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 LIPCP11150 499 aa10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 CD82P27701 267 aa10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 CRABP2P29373 138 aa10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 RPA3P35244 121 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 MSH2P43246 934 aa10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 TLE3Q04726 772 aa10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 PRDX1Q06830 199 aaKnown RBP10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 NAE1Q13564 534 aa10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 TGFBIQ15582 683 aa10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 C18orf21Q32NC0 220 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 PRAMEF13Q5VWM6 474 aa10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 ICE2Q659A1 982 aa10.87□□□□□ -0.67
TNFRSF1A-208ENST00000536194 ZNF425Q6IV72 752 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms