RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 MPP4Q96JB8 637 aa3.5□□□□□ -1.85
VBP1-203ENST00000535916 LGMNQ99538 433 aa3.5□□□□□ -1.85
VBP1-203ENST00000535916 ZNF148Q9UQR1 794 aa3.5□□□□□ -1.85
VBP1-203ENST00000535916 WIPI2Q9Y4P8 454 aa3.5□□□□□ -1.85
VBP1-203ENST00000535916 A0A087WUV0 522 aaPredicted RBP3.49□□□□□ -1.85
VBP1-203ENST00000535916 B4E171 279 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 TFECO14948 347 aaPredicted RBP3.49□□□□□ -1.85
VBP1-203ENST00000535916 LRCH4O75427 683 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 POP4O95707 220 aaKnown RBP3.49□□□□□ -1.85
VBP1-203ENST00000535916 LDHCP07864 332 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 OR2T7P0C7T2 308 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 PTPN3P26045 913 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 PDHA2P29803 388 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 MAPK4P31152 587 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 CSTF2P33240 577 aaKnown RBP eCLIP3.49□□□□□ -1.85
VBP1-203ENST00000535916 GARSP41250 739 aaKnown RBP3.49□□□□□ -1.85
VBP1-203ENST00000535916 TSPAN7P41732 249 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 CASP2P42575 452 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 MFAP4P55083 255 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 KRTAP10-1P60331 282 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 DLK1P80370 383 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 FCHO2Q0JRZ9 810 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 NOTUMQ6P988 496 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 ZFAND4Q86XD8 727 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 SUMF1Q8NBK3 374 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 NPRL2Q8WTW4 380 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 UCMAQ8WVF2 138 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 SKA1Q96BD8 255 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 DHX58Q96C10 678 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 PPM1MQ96MI6 270 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 MAP3K3Q99759 626 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 KIFC3Q9BVG8 833 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 FAM49AQ9H0Q0 323 aaPredicted RBP3.49□□□□□ -1.85
VBP1-203ENST00000535916 TMX4Q9H1E5 349 aaPredicted RBP3.49□□□□□ -1.85
VBP1-203ENST00000535916 TUBB1Q9H4B7 451 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 GKN1Q9NS71 199 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 AASSQ9UDR5 926 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 TRIM17Q9Y577 477 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 STYXL1Q9Y6J8 313 aa3.49□□□□□ -1.85
VBP1-203ENST00000535916 ZNF541Q9H0D2 1346 aa3.48□□□□□ -1.85
VBP1-203ENST00000535916 FEZF1A0PJY2 475 aa3.48□□□□□ -1.85
VBP1-203ENST00000535916 FPGTO14772 594 aa3.48□□□□□ -1.85
VBP1-203ENST00000535916 SCGB1D1O95968 90 aa3.48□□□□□ -1.85
VBP1-203ENST00000535916 HSP90AA1P07900 732 aaKnown RBP3.48□□□□□ -1.85
VBP1-203ENST00000535916 ARSEP51690 589 aa3.48□□□□□ -1.85
VBP1-203ENST00000535916 SETQ01105 290 aaPredicted RBP3.48□□□□□ -1.85
VBP1-203ENST00000535916 CDH18Q13634 790 aa3.48□□□□□ -1.85
VBP1-203ENST00000535916 KRT32Q14532 448 aa3.48□□□□□ -1.85
VBP1-203ENST00000535916 CA9Q16790 459 aa3.48□□□□□ -1.85
VBP1-203ENST00000535916 SLC35D3Q5M8T2 416 aa3.48□□□□□ -1.85
VBP1-203ENST00000535916 HYIQ5T013 277 aa3.48□□□□□ -1.85
VBP1-203ENST00000535916 JAKMIP3Q5VZ66 844 aa3.48□□□□□ -1.85
VBP1-203ENST00000535916 HAUS3Q68CZ6 603 aa3.48□□□□□ -1.85
VBP1-203ENST00000535916 NUDT13Q86X67 352 aa3.48□□□□□ -1.85
VBP1-203ENST00000535916 FAM131BQ86XD5 332 aa3.48□□□□□ -1.85
VBP1-203ENST00000535916 ADGRF2Q8IZF7 708 aa3.48□□□□□ -1.85
VBP1-203ENST00000535916 OLFM1Q99784 485 aa3.48□□□□□ -1.85
VBP1-203ENST00000535916 OVOL2Q9BRP0 275 aa3.48□□□□□ -1.85
VBP1-203ENST00000535916 Q9N2K0 584 aa3.48□□□□□ -1.85
VBP1-203ENST00000535916 C19orf25Q9UFG5 118 aaPredicted RBP3.48□□□□□ -1.85
VBP1-203ENST00000535916 NME7Q9Y5B8 376 aa3.48□□□□□ -1.85
VBP1-203ENST00000535916 PAPSS1O43252 624 aaPredicted RBP3.47□□□□□ -1.85
VBP1-203ENST00000535916 SMIM18P0DKX4 95 aa3.47□□□□□ -1.85
VBP1-203ENST00000535916 SLC9A3P48764 834 aa3.47□□□□□ -1.85
VBP1-203ENST00000535916 GEMIN4P57678 1058 aaKnown RBP3.47□□□□□ -1.85
VBP1-203ENST00000535916 IRX4P78413 519 aa3.47□□□□□ -1.85
VBP1-203ENST00000535916 DDX10Q13206 875 aaKnown RBP3.47□□□□□ -1.85
VBP1-203ENST00000535916 IRF3Q14653 427 aa3.47□□□□□ -1.85
VBP1-203ENST00000535916 TEX38Q6PEX7 206 aa3.47□□□□□ -1.85
VBP1-203ENST00000535916 LEKR1Q6ZMV7 388 aa3.47□□□□□ -1.85
VBP1-203ENST00000535916 CEP57Q86XR8 500 aa3.47□□□□□ -1.85
VBP1-203ENST00000535916 RFT1Q96AA3 541 aa3.47□□□□□ -1.85
VBP1-203ENST00000535916 ZNF597Q96LX8 424 aa3.47□□□□□ -1.85
VBP1-203ENST00000535916 FAM20AQ96MK3 541 aa3.47□□□□□ -1.85
VBP1-203ENST00000535916 FAM218AQ96MZ4 157 aa3.47□□□□□ -1.85
VBP1-203ENST00000535916 HOXD1Q9GZZ0 328 aa3.47□□□□□ -1.85
VBP1-203ENST00000535916 GPN1Q9HCN4 374 aaPredicted RBP3.47□□□□□ -1.85
VBP1-203ENST00000535916 THAP10Q9P2Z0 257 aaPredicted RBP3.47□□□□□ -1.85
VBP1-203ENST00000535916 SEC63Q9UGP8 760 aaKnown RBP3.47□□□□□ -1.85
VBP1-203ENST00000535916 IGKV6D-21A0A0A0MT36 114 aa3.46□□□□□ -1.86
VBP1-203ENST00000535916 TMEM221A6NGB7 291 aa3.46□□□□□ -1.86
VBP1-203ENST00000535916 SNURFLB1AK76 121 aa3.46□□□□□ -1.86
VBP1-203ENST00000535916 H0YAE9 185 aa3.46□□□□□ -1.86
VBP1-203ENST00000535916 PHF1O43189 567 aaPredicted RBP3.46□□□□□ -1.86
VBP1-203ENST00000535916 SNAP91O60641 907 aa3.46□□□□□ -1.86
VBP1-203ENST00000535916 GALR3O60755 368 aaPredicted RBP3.46□□□□□ -1.86
VBP1-203ENST00000535916 HPP00738 406 aa3.46□□□□□ -1.86
VBP1-203ENST00000535916 RPL35AP18077 110 aaKnown RBP3.46□□□□□ -1.86
VBP1-203ENST00000535916 TNFAIP3P21580 790 aa3.46□□□□□ -1.86
VBP1-203ENST00000535916 RXRGP48443 463 aa3.46□□□□□ -1.86
VBP1-203ENST00000535916 EIF5P55010 431 aaKnown RBP3.46□□□□□ -1.86
VBP1-203ENST00000535916 MAT1AQ00266 395 aaKnown RBP3.46□□□□□ -1.86
VBP1-203ENST00000535916 KCTD2Q14681 263 aa3.46□□□□□ -1.86
VBP1-203ENST00000535916 EXT1Q16394 746 aa3.46□□□□□ -1.86
VBP1-203ENST00000535916 TIPARPQ7Z3E1 657 aaKnown RBP3.46□□□□□ -1.86
VBP1-203ENST00000535916 TMPRSS11BQ86T26 416 aa3.46□□□□□ -1.86
VBP1-203ENST00000535916 GPD1LQ8N335 351 aa3.46□□□□□ -1.86
VBP1-203ENST00000535916 SLC37A3Q8NCC5 494 aa3.46□□□□□ -1.86
VBP1-203ENST00000535916 KLHL30-AS1Q8NEE0 82 aa3.46□□□□□ -1.86
VBP1-203ENST00000535916 SSMEM1Q8WWF3 244 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms