RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 CENPTQ96BT3 561 aa4.38□□□□□ -1.71
PRKDC-205ENST00000535375 FAM20AQ96MK3 541 aa4.38□□□□□ -1.71
PRKDC-205ENST00000535375 NECTIN4Q96NY8 510 aa4.38□□□□□ -1.71
PRKDC-205ENST00000535375 DGAT2Q96PD7 388 aa4.38□□□□□ -1.71
PRKDC-205ENST00000535375 NKX3-1Q99801 234 aaPredicted RBP4.38□□□□□ -1.71
PRKDC-205ENST00000535375 MTMR12Q9C0I1 747 aa4.38□□□□□ -1.71
PRKDC-205ENST00000535375 CHST11Q9NPF2 352 aa4.38□□□□□ -1.71
PRKDC-205ENST00000535375 TMED3Q9Y3Q3 217 aa4.38□□□□□ -1.71
PRKDC-205ENST00000535375 ANGPTL3Q9Y5C1 460 aa4.38□□□□□ -1.71
PRKDC-205ENST00000535375 SMAD5-AS1Q9Y6J3 95 aa4.38□□□□□ -1.71
PRKDC-205ENST00000535375 NEMP2A6NFY4 417 aa4.37□□□□□ -1.71
PRKDC-205ENST00000535375 DDHD2O94830 711 aa4.37□□□□□ -1.71
PRKDC-205ENST00000535375 LHCGRP22888 699 aa4.37□□□□□ -1.71
PRKDC-205ENST00000535375 LBX1P52954 281 aa4.37□□□□□ -1.71
PRKDC-205ENST00000535375 MAPK12P53778 367 aa4.37□□□□□ -1.71
PRKDC-205ENST00000535375 GCNT1Q02742 428 aa4.37□□□□□ -1.71
PRKDC-205ENST00000535375 KLC1Q07866 573 aa4.37□□□□□ -1.71
PRKDC-205ENST00000535375 NECTIN1Q15223 517 aa4.37□□□□□ -1.71
PRKDC-205ENST00000535375 KRT71Q3SY84 523 aa4.37□□□□□ -1.71
PRKDC-205ENST00000535375 C16orf54Q6UWD8 224 aa4.37□□□□□ -1.71
PRKDC-205ENST00000535375 BTN2A1Q7KYR7 527 aa4.37□□□□□ -1.71
PRKDC-205ENST00000535375 TICAM2Q86XR7 235 aa4.37□□□□□ -1.71
PRKDC-205ENST00000535375 MAPK15Q8TD08 544 aa4.37□□□□□ -1.71
PRKDC-205ENST00000535375 TEKT4Q8WW24 435 aa4.37□□□□□ -1.71
PRKDC-205ENST00000535375 ZNF830Q96NB3 372 aaPredicted RBP4.37□□□□□ -1.71
PRKDC-205ENST00000535375 SHARPINQ9H0F6 387 aa4.37□□□□□ -1.71
PRKDC-205ENST00000535375 NOL11Q9H8H0 719 aaKnown RBP4.37□□□□□ -1.71
PRKDC-205ENST00000535375 PIH1D3Q9NQM4 214 aaKnown RBP4.37□□□□□ -1.71
PRKDC-205ENST00000535375 SPHK2Q9NRA0 654 aa4.37□□□□□ -1.71
PRKDC-205ENST00000535375 CPSF3Q9UKF6 684 aaKnown RBP4.37□□□□□ -1.71
PRKDC-205ENST00000535375 MAN1B1Q9UKM7 699 aa4.37□□□□□ -1.71
PRKDC-205ENST00000535375 PPP2R2CQ9Y2T4 447 aa4.37□□□□□ -1.71
PRKDC-205ENST00000535375 MOB4Q9Y3A3 225 aa4.37□□□□□ -1.71
PRKDC-205ENST00000535375 C15orf61A6NNL5 157 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 ARPC2O15144 300 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 AHCYL1O43865 530 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 PRKAR1AP10644 381 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 SLC2A2P11168 524 aaPredicted RBP4.36□□□□□ -1.71
PRKDC-205ENST00000535375 MPZP25189 248 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 HNF4AP41235 474 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 MCMDC2Q4G0Z9 681 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 TAF1BQ53T94 588 aaPredicted RBP4.36□□□□□ -1.71
PRKDC-205ENST00000535375 CFAP58Q5T655 872 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 GARNL3Q5VVW2 1013 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 GPR139Q6DWJ6 353 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 SLC25A47Q6Q0C1 308 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 FAM198BQ6UWH4 519 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 NUP54Q7Z3B4 507 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 MMD2Q8IY49 270 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 ZNF519Q8TB69 540 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 FAM222BQ8WU58 562 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 SLCO2A1Q92959 643 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 C10orf90Q96M02 699 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 NSMCE3Q96MG7 304 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 PKP2Q99959 881 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 NUDT16L1Q9BRJ7 211 aaKnown RBP4.36□□□□□ -1.71
PRKDC-205ENST00000535375 ANKZF1Q9H8Y5 726 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 MYNNQ9NPC7 610 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 MAN2C1Q9NTJ4 1040 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 PANK4Q9NVE7 773 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 PRMT7Q9NVM4 692 aaPredicted RBP4.36□□□□□ -1.71
PRKDC-205ENST00000535375 NRBP1Q9UHY1 535 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 RPS6KL1Q9Y6S9 549 aa4.36□□□□□ -1.71
PRKDC-205ENST00000535375 K7ENM7 598 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 PGM3O95394 542 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 RAB40ALP0C0E4 278 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 IRF2P14316 349 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 UGT1A4P22310 534 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 PCGF2P35227 344 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 OPRL1P41146 370 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 ALDH3A2P51648 485 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 VEZF1Q14119 521 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 IL27RAQ6UWB1 636 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 CAMKMTQ7Z624 323 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 NDUFAF2Q8N183 169 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 POMGNT2Q8NAT1 580 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 OR1L3Q8NH93 324 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 PIGBQ92521 554 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 MOB3AQ96BX8 217 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 PIGQQ9BRB3 760 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 PRRG4Q9BZD6 226 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 WWTR1Q9GZV5 400 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 TMX4Q9H1E5 349 aaPredicted RBP4.35□□□□□ -1.71
PRKDC-205ENST00000535375 OLAHQ9NV23 265 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 MORF4L1Q9UBU8 362 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 TRPV2Q9Y5S1 764 aa4.35□□□□□ -1.71
PRKDC-205ENST00000535375 EDDM13A0A1B0GTR0 161 aa4.34□□□□□ -1.71
PRKDC-205ENST00000535375 A0A1W2PPQ1 181 aa4.34□□□□□ -1.71
PRKDC-205ENST00000535375 TCRBV21S2A2A0A5A6 115 aa4.34□□□□□ -1.71
PRKDC-205ENST00000535375 ADAM20O43506 726 aa4.34□□□□□ -1.71
PRKDC-205ENST00000535375 ERAL1O75616 437 aaKnown RBP4.34□□□□□ -1.71
PRKDC-205ENST00000535375 SEC24AO95486 1093 aa4.34□□□□□ -1.71
PRKDC-205ENST00000535375 PRKACGP22612 351 aa4.34□□□□□ -1.71
PRKDC-205ENST00000535375 TSFMP43897 325 aaKnown RBP4.34□□□□□ -1.71
PRKDC-205ENST00000535375 SLC8A3P57103 927 aa4.34□□□□□ -1.71
PRKDC-205ENST00000535375 CYCSP99999 105 aaKnown RBP4.34□□□□□ -1.71
PRKDC-205ENST00000535375 MS4A2Q01362 244 aa4.34□□□□□ -1.71
PRKDC-205ENST00000535375 CUL3Q13618 768 aa4.34□□□□□ -1.71
PRKDC-205ENST00000535375 IL11RAQ14626 422 aa4.34□□□□□ -1.71
PRKDC-205ENST00000535375 KCTD2Q14681 263 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms