RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 FBXL12Q9NXK8 326 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 VPS29Q9UBQ0 182 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 ACSL5Q9ULC5 683 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 LRRK1Q38SD2 2015 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 E7EQ34 232 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 MYO1DO94832 1006 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 PGRP06401 933 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 MYCLP1P12525 358 aaPredicted RBP12.99□□□□□ -0.33
BEST1-208ENST00000534553 HOXB2P14652 356 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 POU3F3P20264 500 aaPredicted RBP12.99□□□□□ -0.33
BEST1-208ENST00000534553 HTR1EP28566 365 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 SLC7A1P30825 629 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 SOX9P48436 509 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 ERFP50548 548 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 TBPL1P62380 186 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 GRSF1Q12849 480 aaKnown RBP eCLIP12.99□□□□□ -0.33
BEST1-208ENST00000534553 TRIP10Q15642 601 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 MAPKAPK3Q16644 382 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 HIST2H2ACQ16777 129 aaPredicted RBP12.99□□□□□ -0.33
BEST1-208ENST00000534553 OGFRL1Q5TC84 451 aaPredicted RBP12.99□□□□□ -0.33
BEST1-208ENST00000534553 HIST2H2AA3Q6FI13 130 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 CRTC3Q6UUV7 619 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 EP400NLQ6ZTU2 488 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 USP30Q70CQ3 517 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 PLCD3Q8N3E9 789 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 PLA2G15Q8NCC3 412 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 ADCY4Q8NFM4 1077 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 TNIP2Q8NFZ5 429 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 POP5Q969H6 163 aaKnown RBP12.99□□□□□ -0.33
BEST1-208ENST00000534553 ZNF570Q96NI8 536 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 ECSITQ9BQ95 431 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 HAUS8Q9BT25 410 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 IL1RL2Q9HB29 575 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 CCDC177Q9NQR7 707 aaPredicted RBP12.99□□□□□ -0.33
BEST1-208ENST00000534553 BATF3Q9NR55 127 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 SPATA6Q9NWH7 488 aaPredicted RBP12.99□□□□□ -0.33
BEST1-208ENST00000534553 CMTM6Q9NX76 183 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 RUVBL1Q9Y265 456 aaKnown RBP12.99□□□□□ -0.33
BEST1-208ENST00000534553 TSC22D4Q9Y3Q8 395 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 AP4S1Q9Y587 144 aa12.99□□□□□ -0.33
BEST1-208ENST00000534553 TMEM265A0A087WTH1 108 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 C9JVG2 144 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 GLULP15104 373 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 AMD1P17707 334 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 LTBRP36941 435 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 SEC13P55735 322 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 C21orf58P58505 322 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 PHEXP78562 749 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 ADGRE1Q14246 886 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 CAPRIN1Q14444 709 aaKnown RBP12.98□□□□□ -0.33
BEST1-208ENST00000534553 NFE2L1Q14494 772 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 PTGR1Q14914 329 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 FXNQ16595 210 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 FBXO43Q4G163 708 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 SPIN4Q56A73 249 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 C2orf27AQ580R0 203 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 TMEM196Q5HYL7 178 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 HABP4Q5JVS0 413 aaKnown RBP12.98□□□□□ -0.33
BEST1-208ENST00000534553 METRNLQ641Q3 311 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 ATG9BQ674R7 924 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 NANOGP8Q6NSW7 305 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 MED27Q6P2C8 311 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 IZUMO2Q6UXV1 221 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 PROSER1Q86XN7 944 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 RAB42Q8N4Z0 105 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 TP53I13Q8NBR0 393 aaPredicted RBP12.98□□□□□ -0.33
BEST1-208ENST00000534553 FAM156AQ8NDB6 213 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 GANCQ8TET4 914 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 KCTD14Q9BQ13 255 aaPredicted RBP12.98□□□□□ -0.33
BEST1-208ENST00000534553 TIMM29Q9BSF4 260 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 ZDHHC5Q9C0B5 715 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 PCBD2Q9H0N5 130 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 PCDHAC1Q9H158 963 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 NANOGQ9H9S0 305 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 ARMC1Q9NVT9 282 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 SPATA7Q9P0W8 599 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 ASF1AQ9Y294 204 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 NCKAP1Q9Y2A7 1128 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 SNX13Q9Y5W8 968 aa12.98□□□□□ -0.33
BEST1-208ENST00000534553 CEP290O15078 2479 aa12.97□□□□□ -0.33
BEST1-208ENST00000534553 FOXE1O00358 373 aaPredicted RBP12.97□□□□□ -0.33
BEST1-208ENST00000534553 PRAMEF4O60810 478 aa12.97□□□□□ -0.33
BEST1-208ENST00000534553 ERN1O75460 977 aaKnown RBP12.97□□□□□ -0.33
BEST1-208ENST00000534553 GPIP06744 558 aa12.97□□□□□ -0.33
BEST1-208ENST00000534553 RPSAP08865 295 aaKnown RBP12.97□□□□□ -0.33
BEST1-208ENST00000534553 UMPSP11172 480 aa12.97□□□□□ -0.33
BEST1-208ENST00000534553 PRPS1L1P21108 318 aa12.97□□□□□ -0.33
BEST1-208ENST00000534553 MSX2P35548 267 aaPredicted RBP12.97□□□□□ -0.33
BEST1-208ENST00000534553 TAP2Q03519 686 aa12.97□□□□□ -0.33
BEST1-208ENST00000534553 IRF4Q15306 451 aa12.97□□□□□ -0.33
BEST1-208ENST00000534553 FAM174BQ3ZCQ3 159 aa12.97□□□□□ -0.33
BEST1-208ENST00000534553 CCSMST1Q4G0I0 132 aa12.97□□□□□ -0.33
BEST1-208ENST00000534553 TMEM259Q4ZIN3 620 aa12.97□□□□□ -0.33
BEST1-208ENST00000534553 PRAMEF9Q5VWM5 478 aa12.97□□□□□ -0.33
BEST1-208ENST00000534553 SLC2A7Q6PXP3 512 aa12.97□□□□□ -0.33
BEST1-208ENST00000534553 XKR5Q6UX68 686 aa12.97□□□□□ -0.33
BEST1-208ENST00000534553 RNF111Q6ZNA4 994 aa12.97□□□□□ -0.33
BEST1-208ENST00000534553 SLCO4C1Q6ZQN7 724 aa12.97□□□□□ -0.33
BEST1-208ENST00000534553 HORMAD1Q86X24 394 aa12.97□□□□□ -0.33
BEST1-208ENST00000534553 KIAA2013Q8IYS2 634 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms