RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 ATP5OP48047 213 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 RXRGP48443 463 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 CYP2J2P51589 502 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 RAB4BP61018 213 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 EEF1A1P68104 462 aaKnown RBP4.17□□□□□ -1.74
ITGB1-219ENST00000534049 OTUD4Q01804 1114 aaKnown RBP4.17□□□□□ -1.74
ITGB1-219ENST00000534049 TNFAIP2Q03169 654 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 CEBPZQ03701 1054 aaKnown RBP4.17□□□□□ -1.74
ITGB1-219ENST00000534049 EEF1A2Q05639 463 aaKnown RBP4.17□□□□□ -1.74
ITGB1-219ENST00000534049 LTBQ06643 244 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 ASPHQ12797 758 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 BAMBIQ13145 260 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 TBX2Q13207 712 aaPredicted RBP4.17□□□□□ -1.74
ITGB1-219ENST00000534049 TRPC3Q13507 836 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 ACVR2BQ13705 512 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 HNRNPDQ14103 355 aaKnown RBP4.17□□□□□ -1.74
ITGB1-219ENST00000534049 GPR18Q14330 331 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 EFTUD2Q15029 972 aaKnown RBP eCLIP4.17□□□□□ -1.741e-6■■■■■ 49.2
ITGB1-219ENST00000534049 ZACNQ401N2 412 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 SETMARQ53H47 684 aaPredicted RBP4.17□□□□□ -1.74
ITGB1-219ENST00000534049 TCTE1Q5JU00 501 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 ERMARDQ5T6L9 678 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 GRTP1Q5TC63 336 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 EEF1A1P5Q5VTE0 462 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 PDPK2PQ6A1A2 396 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 FAM109BQ6ICB4 259 aaPredicted RBP4.17□□□□□ -1.74
ITGB1-219ENST00000534049 MZT2BQ6NZ67 158 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 LINC00299Q6ZSB3 139 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 SLC16A12Q6ZSM3 486 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 PLEKHM3Q6ZWE6 761 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 PRUNE1Q86TP1 453 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 TMEM200AQ86VY9 491 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 CNTROBQ8N137 903 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 FBXL16Q8N461 479 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 TSPYL6Q8N831 410 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 CEP70Q8NHQ1 597 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 SPATA3Q8NHX4 192 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 OIT3Q8WWZ8 545 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 MYDGFQ969H8 173 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 VPS33AQ96AX1 596 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 C7orf34Q96L11 122 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 B3GALT6Q96L58 329 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 ZNF560Q96MR9 790 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 ZNF578Q96N58 590 aaPredicted RBP4.17□□□□□ -1.74
ITGB1-219ENST00000534049 SERPINB12Q96P63 405 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 MECRQ9BV79 373 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 MRPS26Q9BYN8 205 aaKnown RBP4.17□□□□□ -1.74
ITGB1-219ENST00000534049 OR2B2Q9GZK3 357 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 NYXQ9GZU5 481 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 LSG1Q9H089 658 aaKnown RBP4.17□□□□□ -1.74
ITGB1-219ENST00000534049 LRMDAQ9H2I8 198 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 DPH5Q9H2P9 285 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 SLCO5A1Q9H2Y9 848 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 Q9H521 79 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 TRIM45Q9H8W5 580 aaPredicted RBP4.17□□□□□ -1.74
ITGB1-219ENST00000534049 NTN4Q9HB63 628 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 LZTFL1Q9NQ48 299 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 MRPL40Q9NQ50 206 aaKnown RBP4.17□□□□□ -1.74
ITGB1-219ENST00000534049 ZC4H2Q9NQZ6 224 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 DDX18Q9NVP1 670 aaKnown RBP4.17□□□□□ -1.74
ITGB1-219ENST00000534049 NMRK1Q9NWW6 199 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 ARL15Q9NXU5 204 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 TMOD3Q9NYL9 352 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 IFNKQ9P0W0 207 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 STX18Q9P2W9 335 aaKnown RBP4.17□□□□□ -1.74
ITGB1-219ENST00000534049 CD300AQ9UGN4 299 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 LNPEPQ9UIQ6 1025 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 SLC25A13Q9UJS0 675 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 GMEB2Q9UKD1 530 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 ARHGAP26Q9UNA1 814 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 SAR1BQ9Y6B6 198 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 MAD1L1Q9Y6D9 718 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 FRMPD4Q14CM0 1322 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 UMODL1Q5DID0 1318 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 BCORQ6W2J9 1755 aa4.17□□□□□ -1.74
ITGB1-219ENST00000534049 TRBV5-7A0A0A0MS05 114 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 A0A1W2PQ67 120 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 ARHGEF37A1IGU5 675 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 ACOD1A6NK06 481 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 AQP12BA6NM10 295 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 TCP11X1B4DZS4 312 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 SLCO1B7G3V0H7 640 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 STMND1H3BQB6 276 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 H7C0C1 242 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 UBXN8O00124 270 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 GTPBP1O00178 669 aaKnown RBP4.16□□□□□ -1.74
ITGB1-219ENST00000534049 RNF103O00237 685 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 NOS1APO75052 506 aaPredicted RBP4.16□□□□□ -1.74
ITGB1-219ENST00000534049 ACTL6BO94805 426 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 GUCA1CO95843 209 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 IL6P05231 212 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 ATP5BP06576 529 aaKnown RBP4.16□□□□□ -1.74
ITGB1-219ENST00000534049 KRT16P08779 473 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 MMP10P09238 476 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 FGF3P11487 239 aaPredicted RBP4.16□□□□□ -1.74
ITGB1-219ENST00000534049 ATP6V1B1P15313 513 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 F8A1P23610 371 aa4.16□□□□□ -1.74
ITGB1-219ENST00000534049 PBLDP30039 288 aaPredicted RBP4.16□□□□□ -1.74
ITGB1-219ENST00000534049 MTIF2P46199 727 aaKnown RBP4.16□□□□□ -1.74
ITGB1-219ENST00000534049 SULT1E1P49888 294 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms