RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 MAGEL2Q9UJ55 1249 aa9.42□□□□□ -0.9
CHKA-207ENST00000533728 CNOT6Q9ULM6 557 aaKnown RBP9.42□□□□□ -0.9
CHKA-207ENST00000533728 SNX6Q9UNH7 406 aa9.42□□□□□ -0.9
CHKA-207ENST00000533728 MAPRE3Q9UPY8 281 aa9.42□□□□□ -0.9
CHKA-207ENST00000533728 PDE10AQ9Y233 779 aa9.42□□□□□ -0.9
CHKA-207ENST00000533728 MSRB2Q9Y3D2 182 aa9.42□□□□□ -0.9
CHKA-207ENST00000533728 PCDHB3Q9Y5E6 796 aa9.42□□□□□ -0.9
CHKA-207ENST00000533728 ZFHX3Q15911 3703 aa9.42□□□□□ -0.9
CHKA-207ENST00000533728 A0A0U1RQS6 177 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 ARPC2O15144 300 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 PRMT3O60678 531 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 TULP3O75386 442 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 TNFAIP8O95379 198 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 ADH1CP00326 375 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 CISD3P0C7P0 127 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 HSD3B1P14060 373 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 TIMP2P16035 220 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 TCN1P20061 433 aaPredicted RBP9.41□□□□□ -0.9
CHKA-207ENST00000533728 ATP6V1B2P21281 511 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 HSD3B2P26439 372 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 IL12AP29459 219 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 AKT1P31749 480 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 MSX2P35548 267 aaPredicted RBP9.41□□□□□ -0.9
CHKA-207ENST00000533728 MTHFRP42898 656 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 HTR6P50406 440 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 PNLIPRP1P54315 467 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 SH3BGRP55822 239 aaPredicted RBP9.41□□□□□ -0.9
CHKA-207ENST00000533728 LIPEQ05469 1076 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 RALGDSQ12967 914 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 ABRAXAS2Q15018 415 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 EIF4HQ15056 248 aaKnown RBP9.41□□□□□ -0.9
CHKA-207ENST00000533728 LRRC36Q1X8D7 754 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 ZNF284Q2VY69 593 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 PAGE3Q5JUK9 113 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 NANOGP8Q6NSW7 305 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 DLEU7Q6UYE1 221 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 UBE2R2Q712K3 238 aaPredicted RBP9.41□□□□□ -0.9
CHKA-207ENST00000533728 CHST14Q8NCH0 376 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 FBXO15Q8NCQ5 510 aaPredicted RBP9.41□□□□□ -0.9
CHKA-207ENST00000533728 FAM156AQ8NDB6 213 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 GLMNQ92990 594 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 ESAMQ96AP7 390 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 EME1Q96AY2 570 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 CMTM7Q96FZ5 175 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 CENPNQ96H22 339 aaPredicted RBP9.41□□□□□ -0.9
CHKA-207ENST00000533728 FCRL1Q96LA6 429 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 GBP5Q96PP8 586 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 KCTD14Q9BQ13 255 aaPredicted RBP9.41□□□□□ -0.9
CHKA-207ENST00000533728 C9orf16Q9BUW7 83 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 FOXQ1Q9C009 403 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 ACTL8Q9H568 366 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 NANOGQ9H9S0 305 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 KCNK12Q9HB15 430 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 LRTM1Q9HBL6 345 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 AGPAT4Q9NRZ5 378 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 C1orf109Q9NX04 203 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 ARL15Q9NXU5 204 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 OBP2AQ9NY56 170 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 GIMAP2Q9UG22 337 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 TMPRSS11EQ9UL52 423 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 MAN2B2Q9Y2E5 1009 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 AP4B1Q9Y6B7 739 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 PCNX2A6NKB5 2137 aa9.41□□□□□ -0.9
CHKA-207ENST00000533728 ITPR2Q14571 2701 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 CKAP5Q14008 2032 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 KCNE1BA0A087WTH5 132 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 SMIM31A0A1B0GVY4 71 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 TCRBV5S2A0A599 114 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 ERN1O75460 977 aaKnown RBP9.4□□□□□ -0.9
CHKA-207ENST00000533728 PSIP1O75475 530 aaKnown RBP9.4□□□□□ -0.9
CHKA-207ENST00000533728 LEFTY1O75610 366 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 RFPL2O75678 378 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 KCNH1O95259 989 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 GUCA1CO95843 209 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 PRNPP04156 253 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 PABPC4LP0CB38 370 aaKnown RBP9.4□□□□□ -0.9
CHKA-207ENST00000533728 UBTFL6P0CB48 400 aaPredicted RBP9.4□□□□□ -0.9
CHKA-207ENST00000533728 ATXN8OSP0DMR3 200 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 G6PDP11413 515 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 SLC2A4P14672 509 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 IL1RNP18510 177 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 ITGB6P18564 788 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 FASP25445 335 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 MMP12P39900 470 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 GRIA3P42263 894 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 DGKGP49619 791 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 CLDN8P56748 225 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 C21orf58P58505 322 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 CSTF3Q12996 717 aaKnown RBP9.4□□□□□ -0.9
CHKA-207ENST00000533728 E2F2Q14209 437 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 DHCR24Q15392 516 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 SLC5A9Q2M3M2 681 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 DPY19L1Q2PZI1 675 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 RFTN2Q52LD8 501 aaPredicted RBP9.4□□□□□ -0.9
CHKA-207ENST00000533728 FBXO48Q5FWF7 155 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 TMTC4Q5T4D3 741 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 LIPJQ5W064 366 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 TMEM215Q68D42 235 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 KIAA1211LQ6NV74 962 aa9.4□□□□□ -0.9
CHKA-207ENST00000533728 ERAP2Q6P179 960 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms