RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 NKAIN1Q4KMZ8 207 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 RNF187Q5TA31 235 aaPredicted RBP17.07■□□□□ 0.32
SMG1-203ENST00000532700 TTLL10Q6ZVT0 673 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 PPP1R32Q7Z5V6 425 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 MRGPREQ86SM8 312 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 CREG2Q8IUH2 290 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 FDCSPQ8NFU4 85 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 HMGCLL1Q8TB92 370 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 ZNF285Q96NJ3 590 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 TCF12Q99081 682 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 PKP4Q99569 1192 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 ACSS2Q9NR19 701 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 IRAK4Q9NWZ3 460 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 SAMD15Q9P1V8 674 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 PTRH2Q9Y3E5 179 aaKnown RBP17.07■□□□□ 0.32
SMG1-203ENST00000532700 MAD1L1Q9Y6D9 718 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 AP1M2Q9Y6Q5 423 aa17.07■□□□□ 0.32
SMG1-203ENST00000532700 MDC1Q14676 2089 aaKnown RBP17.06■□□□□ 0.32
SMG1-203ENST00000532700 ANKRD12Q6UB98 2062 aa17.06■□□□□ 0.32
SMG1-203ENST00000532700 HEATR5BQ9P2D3 2071 aa17.06■□□□□ 0.32
SMG1-203ENST00000532700 A6NL46 340 aa17.06■□□□□ 0.32
SMG1-203ENST00000532700 C9J4A7 227 aa17.06■□□□□ 0.32
SMG1-203ENST00000532700 KPNA5O15131 536 aa17.06■□□□□ 0.32
SMG1-203ENST00000532700 HBQ1P09105 142 aa17.06■□□□□ 0.32
SMG1-203ENST00000532700 GABRB3P28472 473 aa17.06■□□□□ 0.32
SMG1-203ENST00000532700 ATP5DP30049 168 aa17.06■□□□□ 0.32
SMG1-203ENST00000532700 DCDP81605 110 aaKnown RBP17.06■□□□□ 0.32
SMG1-203ENST00000532700 SRSF1Q07955 248 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMG1-203ENST00000532700 PRR30Q53SZ7 412 aaPredicted RBP17.06■□□□□ 0.32
SMG1-203ENST00000532700 SHISA6Q6ZSJ9 500 aa17.06■□□□□ 0.32
SMG1-203ENST00000532700 SHISA5Q8N114 240 aa17.06■□□□□ 0.32
SMG1-203ENST00000532700 CD200R1Q8TD46 325 aa17.06■□□□□ 0.32
SMG1-203ENST00000532700 DPH2Q9BQC3 489 aaPredicted RBP17.06■□□□□ 0.32
SMG1-203ENST00000532700 SLC25A23Q9BV35 468 aa17.06■□□□□ 0.32
SMG1-203ENST00000532700 C20orf96Q9NUD7 363 aaPredicted RBP17.06■□□□□ 0.32
SMG1-203ENST00000532700 INTS10Q9NVR2 710 aaKnown RBP17.06■□□□□ 0.32
SMG1-203ENST00000532700 LUZP4Q9P127 313 aa17.06■□□□□ 0.32
SMG1-203ENST00000532700 IFT80Q9P2H3 777 aaPredicted RBP17.06■□□□□ 0.32
SMG1-203ENST00000532700 A0A0J9YVX5 310 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 MYO1CO00159 1063 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 KDM1AO60341 852 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 AGXTP21549 392 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 CD97P48960 835 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 VSX2P58304 361 aaPredicted RBP17.05■□□□□ 0.32
SMG1-203ENST00000532700 SARNPP82979 210 aaKnown RBP17.05■□□□□ 0.32
SMG1-203ENST00000532700 DHX9Q08211 1270 aaKnown RBP17.05■□□□□ 0.32
SMG1-203ENST00000532700 HSP90AA5PQ58FG0 334 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 HP1BP3Q5SSJ5 553 aaPredicted RBP17.05■□□□□ 0.32
SMG1-203ENST00000532700 TLDC1Q6P9B6 456 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 SYT10Q6XYQ8 523 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 CYHR1Q6ZMK1 362 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 PIWIL4Q7Z3Z4 852 aaKnown RBP17.05■□□□□ 0.32
SMG1-203ENST00000532700 PPIL6Q8IXY8 311 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 AMER2Q8N7J2 671 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 GSDMBQ8TAX9 411 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 PROKR1Q8TCW9 393 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 SEC14L1Q92503 715 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 DLG3Q92796 817 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 RUNDC3BQ96NL0 473 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 NDNQ99608 321 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 GPR21Q99679 349 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 NDC1Q9BTX1 674 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 IARS2Q9NSE4 1012 aaKnown RBP17.05■□□□□ 0.32
SMG1-203ENST00000532700 CTSFQ9UBX1 484 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 FBXO5Q9UKT4 447 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 PCDHGA9Q9Y5G4 932 aaKnown RBP17.05■□□□□ 0.32
SMG1-203ENST00000532700 KLK4Q9Y5K2 254 aa17.05■□□□□ 0.32
SMG1-203ENST00000532700 SHANK1Q9Y566 2161 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 OR2A25A4D2G3 310 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 E5RI56 91 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 DNALI1O14645 258 aaPredicted RBP17.04■□□□□ 0.32
SMG1-203ENST00000532700 TP73O15350 636 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 ERVK-10P10266 1014 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 PAMP19021 973 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 ALAS2P22557 587 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 OR1D4P47884 311 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 THOC5Q13769 683 aaKnown RBP17.04■□□□□ 0.32
SMG1-203ENST00000532700 PTK6Q13882 451 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 CRYMQ14894 314 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 LONRF1Q17RB8 773 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 RBM20Q5T481 1227 aaKnown RBP17.04■□□□□ 0.32
SMG1-203ENST00000532700 RNF44Q7L0R7 432 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 LRRC56Q8IYG6 542 aaPredicted RBP17.04■□□□□ 0.32
SMG1-203ENST00000532700 CPNE9Q8IYJ1 553 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 OR9A1PQ8NGU1 263 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 OR2Y1Q8NGV0 311 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 ZNF480Q8WV37 535 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 MIB2Q96AX9 1013 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 SLC22A18Q96BI1 424 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 C10orf90Q96M02 699 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 SPSB2Q99619 263 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 SELENOSQ9BQE4 189 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 TRIM51Q9BSJ1 452 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 DPH7Q9BTV6 452 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 RAB11FIP5Q9BXF6 653 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 CUTCQ9NTM9 273 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 TXLNGQ9NUQ3 528 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 SPATA7Q9P0W8 599 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 NDOR1Q9UHB4 597 aa17.04■□□□□ 0.32
SMG1-203ENST00000532700 ADAMTS6Q9UKP5 1117 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms