RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 PIK3CGP48736 1102 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 IFITM2Q01629 132 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 RPL6Q02878 288 aaKnown RBP6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 HSPA14Q0VDF9 509 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 PRKG2Q13237 762 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 POU4F3Q15319 338 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 SH3PXD2AQ5TCZ1 1133 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 DDI2Q5TDH0 399 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 DDX53Q86TM3 631 aaKnown RBP6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 HID1Q8IV36 788 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 SLC34A3Q8N130 599 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 MAPK15Q8TD08 544 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 KLHL6Q8WZ60 621 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 ASB2Q96Q27 587 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 C11orf84Q9BUA3 381 aaPredicted RBP6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 CRISPLD1Q9H336 500 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 RANBP3Q9H6Z4 567 aaPredicted RBP6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 GMEB2Q9UKD1 530 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 RAB19A4D1S5 217 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 ACOT8O14734 319 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 PSMD3O43242 534 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 SGCEO43556 437 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 CPNE6O95741 557 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 MLNP12872 115 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 BMP1P13497 986 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 EPCAMP16422 314 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 L1CAMP32004 1257 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 ATP6V1E1P36543 226 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 WASP42768 502 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 MAGEA2P43356 314 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 HTR3AP46098 478 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 ERVFC1P60507 584 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 RPS7P62081 194 aaKnown RBP6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 CD47Q08722 323 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 FBXO43Q4G163 708 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 ANKRD54Q6NXT1 300 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 PARP16Q8N5Y8 322 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 ZNF366Q8N895 744 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 YIPF7Q8N8F6 280 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 GDPD1Q8N9F7 314 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 FNDC5Q8NAU1 212 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 OR2T12Q8NG77 320 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 JOSD2Q8TAC2 188 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 TTC9Q92623 222 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 LRCH3Q96II8 777 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 ZC3H10Q96K80 434 aaKnown RBP6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 TRMOQ9BU70 441 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 TRIM54Q9BYV2 358 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 MAGEB5Q9BZ81 275 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 WDCPQ9H6R7 721 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 SMURF2Q9HAU4 748 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 TMPRSS4Q9NRS4 437 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 SNTG1Q9NSN8 517 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 POLG2Q9UHN1 485 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 ZNF175Q9Y473 711 aa6.64□□□□□ -1.35
TGFBR3-209ENST00000532540 A0A0A0MRY4 1105 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 FAM95CA0A1B0GW59 222 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 A0A1W2PQH9 124 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 E9PAM4 449 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 M0R233 179 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 KPNA3O00505 521 aaPredicted RBP6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 MYL12BO14950 172 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 KCNJ13O60928 360 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 RFPL3O75679 317 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 TRAPPC2P0DI81 140 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 TRAPPC2BP0DI82 140 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 HOXB6P17509 224 aaKnown RBP6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 ARNTP27540 789 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 ASPAP45381 313 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 RORCP51449 518 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 NRLP54845 237 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 ZNF33BQ06732 778 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 CAMK1Q14012 370 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 IL18Q14116 193 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 KCNJ11Q14654 390 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 GPR68Q15743 365 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 UPP1Q16831 310 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 CDKL4Q5MAI5 379 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 MZT2AQ6P582 158 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 FAM183BPQ6ZVS7 135 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 ANKRD33Q7Z3H0 272 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 LRRTM3Q86VH5 581 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 DENND1CQ8IV53 801 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 CARNMT1Q8N4J0 409 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 EFHBQ8N7U6 833 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 C7orf57Q8NEG2 295 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 FAM83FQ8NEG4 500 aaPredicted RBP6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 OR5K1Q8NHB7 308 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 BPIFB1Q8TDL5 484 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 SLC7A6Q92536 515 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 ZSWIM3Q96MP5 696 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 SPATA13Q96N96 652 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 CNPPD1Q9BV87 410 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 KIFC1Q9BW19 673 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 TTLL2Q9BWV7 592 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 MMP28Q9H239 520 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 KCNN2Q9H2S1 579 aa6.63□□□□□ -1.35
TGFBR3-209ENST00000532540 NIPAL2Q9H841 368 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms