RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 S100A14Q9HCY8 104 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 C1orf109Q9NX04 203 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 PDP1Q9P0J1 537 aaPredicted RBP11.03□□□□□ -0.64
PTPRK-221ENST00000532331 HCN2Q9UL51 889 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 SLX4Q8IY92 1834 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 H0YGN5 161 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 KHNYNO15037 678 aaKnown RBP11.03□□□□□ -0.64
PTPRK-221ENST00000532331 LDB2O43679 373 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 CHRNGP07510 517 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 SAGP10523 405 aaPredicted RBP11.03□□□□□ -0.64
PTPRK-221ENST00000532331 CD72P21854 359 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 RYKP34925 604 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 PTPN5P54829 565 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 CASP6P55212 293 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 RGS8P57771 180 aaPredicted RBP11.03□□□□□ -0.64
PTPRK-221ENST00000532331 FAM26DQ5JW98 314 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 PAQR3Q6TCH7 311 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 JAZF1Q86VZ6 243 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 HPS6Q86YV9 775 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 ZNF781Q8N8C0 355 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 CMTM7Q96FZ5 175 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 MTERF1Q99551 399 aaKnown RBP11.03□□□□□ -0.64
PTPRK-221ENST00000532331 TRIM8Q9BZR9 551 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 FZD3Q9NPG1 666 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 GRHL1Q9NZI5 618 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 PIP5K1BO14986 540 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 PGM3O95394 542 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 OAS1P00973 400 aaKnown RBP11.03□□□□□ -0.64
PTPRK-221ENST00000532331 PRKCHP24723 683 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 HNF1BP35680 557 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 LSM3P62310 102 aaKnown RBP11.03□□□□□ -0.64
PTPRK-221ENST00000532331 SLC25A11Q02978 314 aaKnown RBP11.03□□□□□ -0.64
PTPRK-221ENST00000532331 RAPSNQ13702 412 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 PTGES3Q15185 160 aaKnown RBP11.03□□□□□ -0.64
PTPRK-221ENST00000532331 NIPAL1Q6NVV3 410 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 GALNT7Q86SF2 657 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 ZNF598Q86UK7 904 aaKnown RBP11.03□□□□□ -0.64
PTPRK-221ENST00000532331 WDR60Q8WVS4 1066 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 KBTBD7Q8WVZ9 684 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 PYCR2Q96C36 320 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 TBL1XR1Q9BZK7 514 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 HEBP1Q9NRV9 189 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 HIDE1A8MVS5 230 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 SAP18O00422 153 aaKnown RBP11.03□□□□□ -0.64
PTPRK-221ENST00000532331 SCELO95171 688 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 VN1R2Q8NFZ6 395 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 LPGAT1Q92604 370 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 ROPN1LQ96C74 230 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 TGM7Q96PF1 710 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 RBM4BQ9BQ04 359 aaKnown RBP11.03□□□□□ -0.64
PTPRK-221ENST00000532331 GINS4Q9BRT9 223 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 RBM4Q9BWF3 364 aaKnown RBP11.03□□□□□ -0.64
PTPRK-221ENST00000532331 TMLHEQ9NVH6 421 aa11.03□□□□□ -0.64
PTPRK-221ENST00000532331 SDC3O75056 442 aa11.02□□□□□ -0.64
PTPRK-221ENST00000532331 MYOGP15173 224 aa11.02□□□□□ -0.64
PTPRK-221ENST00000532331 CD70P32970 193 aa11.02□□□□□ -0.64
PTPRK-221ENST00000532331 ANKRD33Q7Z3H0 272 aa11.02□□□□□ -0.64
PTPRK-221ENST00000532331 OXR1Q8N573 874 aa11.02□□□□□ -0.64
PTPRK-221ENST00000532331 SLC35B2Q8TB61 432 aa11.02□□□□□ -0.64
PTPRK-221ENST00000532331 TSACCQ96A04 125 aaPredicted RBP11.02□□□□□ -0.64
PTPRK-221ENST00000532331 ESAMQ96AP7 390 aa11.02□□□□□ -0.64
PTPRK-221ENST00000532331 KCNH6Q9H252 994 aa11.02□□□□□ -0.64
PTPRK-221ENST00000532331 ADAP2Q9NPF8 381 aa11.02□□□□□ -0.64
PTPRK-221ENST00000532331 TNFRSF11BO00300 401 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 CAPGP40121 348 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 CLCN7P51798 805 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 NCBP2P52298 156 aaKnown RBP eCLIP11.02□□□□□ -0.65
PTPRK-221ENST00000532331 RPS15P62841 145 aaKnown RBP11.02□□□□□ -0.65
PTPRK-221ENST00000532331 DCTN2Q13561 401 aaKnown RBP11.02□□□□□ -0.65
PTPRK-221ENST00000532331 APCDD1Q8J025 514 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 GLYATL1Q969I3 302 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 CLSTN3Q9BQT9 956 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 ALG2Q9H553 416 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 NOL6Q9H6R4 1146 aaKnown RBP11.02□□□□□ -0.65
PTPRK-221ENST00000532331 MAGEE1Q9HCI5 957 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 IFT80Q9P2H3 777 aaPredicted RBP11.02□□□□□ -0.65
PTPRK-221ENST00000532331 SH3GLB1Q9Y371 365 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 TCF4P15884 667 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 HNRNPA2B1P22626 353 aaKnown RBP11.02□□□□□ -0.65
PTPRK-221ENST00000532331 IGFBP5P24593 272 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 SLC26A3P40879 764 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 KCNJ5P48544 419 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 ERVFC1P60507 584 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 OLR1P78380 273 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 ITGADQ13349 1161 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 TMEM240Q5SV17 173 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 SLC9A4Q6AI14 798 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 LRRC70Q7Z2Q7 622 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 LRRTM3Q86VH5 581 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.02□□□□□ -0.65
PTPRK-221ENST00000532331 UMODL1-AS1Q8N2C9 162 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 BANPQ8N9N5 519 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 GLB1L3Q8NCI6 653 aaPredicted RBP11.02□□□□□ -0.65
PTPRK-221ENST00000532331 TRPV3Q8NET8 790 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 PSKH2Q96QS6 385 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 BCL2L14Q9BZR8 327 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 SERINC1Q9NRX5 453 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 PLAGL1Q9UM63 463 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 FADS3Q9Y5Q0 445 aa11.02□□□□□ -0.65
PTPRK-221ENST00000532331 FADS2P1A8MWK0 482 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms