RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 FBXO39Q8N4B4 442 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 SPATA6LQ8N4H0 392 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 OR2L3Q8NG85 312 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 OR56A3Q8NH54 315 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 ACMSDQ8TDX5 336 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 ATL1Q8WXF7 558 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 NXPE2Q96DL1 559 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 CABS1Q96KC9 395 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 HIST1H2AHQ96KK5 128 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 ATOH8Q96SQ7 321 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 HIST1H2AJQ99878 128 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 H2AFJQ9BTM1 129 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 TRIM54Q9BYV2 358 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 ROPN1BQ9BZX4 212 aaPredicted RBP13.95□□□□□ -0.18
CPSF1-206ENST00000531480 ROPN1Q9HAT0 212 aaPredicted RBP13.95□□□□□ -0.18
CPSF1-206ENST00000531480 OCIAD1Q9NX40 245 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 ARL15Q9NXU5 204 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 AKAP7Q9P0M2 348 aaPredicted RBP13.95□□□□□ -0.18
CPSF1-206ENST00000531480 KLHL3Q9UH77 587 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 TLK1Q9UKI8 766 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 ACSL6Q9UKU0 697 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 PCDHB11Q9Y5F2 797 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 PCDHGA7Q9Y5G6 932 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 PCDHGA3Q9Y5H0 932 aa13.95□□□□□ -0.18
CPSF1-206ENST00000531480 A8MU76 341 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 ISM1B1AKI9 464 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 TARM1B6A8C7 271 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 KERAO60938 352 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 RASSF9O75901 435 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 CCL4P13236 92 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 ST6GAL1P15907 406 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 CDH3P22223 829 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 CCND1P24385 295 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 GGT5P36269 586 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 ETV5P41161 510 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 GABRA4P48169 554 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 PPM1FP49593 454 aaPredicted RBP13.94□□□□□ -0.18
CPSF1-206ENST00000531480 HNMTP50135 292 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 GABREP78334 506 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 PRDX1Q06830 199 aaKnown RBP13.94□□□□□ -0.18
CPSF1-206ENST00000531480 ZIC1Q15915 447 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 FAM83EQ2M2I3 478 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 C3orf38Q5JPI3 329 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 SNAP47Q5SQN1 464 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 IQCKQ8N0W5 287 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 PLD6Q8N2A8 252 aaKnown RBP13.94□□□□□ -0.18
CPSF1-206ENST00000531480 RIBC1Q8N443 379 aaPredicted RBP13.94□□□□□ -0.18
CPSF1-206ENST00000531480 PDPRQ8NCN5 879 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 STAG3L4Q8TBR4 150 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 KCTD4Q8WVF5 259 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 ZUFSPQ96AP4 578 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 RHBDF1Q96CC6 855 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 NXNL1Q96CM4 212 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 DDA1Q9BW61 102 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 ZMYND15Q9H091 742 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 MED4Q9NPJ6 270 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 LGALS13Q9UHV8 139 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 RALYQ9UKM9 306 aaKnown RBP13.94□□□□□ -0.18
CPSF1-206ENST00000531480 ZMIZ1Q9ULJ6 1067 aa13.94□□□□□ -0.18
CPSF1-206ENST00000531480 DMXL2Q8TDJ6 3036 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 IGKV1-8A0A0C4DH67 115 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 SLC9B1P1A6NJY1 282 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 NVLO15381 856 aaKnown RBP13.93□□□□□ -0.18
CPSF1-206ENST00000531480 KLK8O60259 260 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 SYF2O95926 243 aaKnown RBP13.93□□□□□ -0.18
CPSF1-206ENST00000531480 ANXA5P08758 320 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 MYZAPP0CAP1 466 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 MTHFD2P13995 350 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 HGFP14210 728 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 TFEBP19484 476 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 ITIH1P19827 911 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 PSMB5P28074 263 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 GRIA3P42263 894 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 SLC6A12P48065 614 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 RAB15P59190 212 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 ERVPABLB-1P60509 514 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 TBPL1P62380 186 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 RELAQ04206 551 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 IL11RAQ14626 422 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 KIAA1614Q5VZ46 1190 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 SUSD1Q6UWL2 747 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 BPHLQ86WA6 291 aaPredicted RBP13.93□□□□□ -0.18
CPSF1-206ENST00000531480 SYTL1Q8IYJ3 562 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 CYP4X1Q8N118 509 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 C2orf73Q8N5S3 287 aaPredicted RBP13.93□□□□□ -0.18
CPSF1-206ENST00000531480 C19orf47Q8N9M1 422 aaKnown RBP13.93□□□□□ -0.18
CPSF1-206ENST00000531480 PPFIBP2Q8ND30 876 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 EPS8L3Q8TE67 593 aaKnown RBP13.93□□□□□ -0.18
CPSF1-206ENST00000531480 ZCCHC14Q8WYQ9 949 aaKnown RBP13.93□□□□□ -0.18
CPSF1-206ENST00000531480 TCTN2Q96GX1 697 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 TAAR9Q96RI9 348 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 SPRY4Q9C004 299 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 PCBD2Q9H0N5 130 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 ANKMY1Q9P2S6 941 aa13.93□□□□□ -0.18
CPSF1-206ENST00000531480 OR2A25A4D2G3 310 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 EFCAB7A8K855 629 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 C9orf172C9J069 976 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 H3BMH7 237 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 BRINP1O60477 761 aa13.92□□□□□ -0.18
CPSF1-206ENST00000531480 JMJD7P0C870 316 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms