RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 ENPP6Q6UWR7 440 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 AHSA2Q719I0 299 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 SNX20Q7Z614 316 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 ZNF567Q8N184 647 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 FAM86B1Q8N7N1 296 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 MCPH1Q8NEM0 835 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 OR6M1Q8NGM8 313 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 C9orf43Q8TAL5 461 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-214ENST00000530886 ELMO1Q92556 727 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 KIAA1191Q96A73 305 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 P2RY11Q96G91 374 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 MSLNLQ96KJ4 702 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 MRGPRX2Q96LB1 330 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 NPAS1Q99742 590 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 MRIQ9BWK5 157 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 TAPBPLQ9BX59 468 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 ASB7Q9H672 318 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 TRIM45Q9H8W5 580 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-214ENST00000530886 ZFP64Q9NPA5 681 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 SLC35C2Q9NQQ7 365 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 GKN1Q9NS71 199 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 GPATCH2LQ9NWQ4 482 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 PIH1D1Q9NWS0 290 aaKnown RBP7.93□□□□□ -1.14
CSDE1-214ENST00000530886 HPF1Q9NWY4 346 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 MAP3K20Q9NYL2 800 aaKnown RBP7.93□□□□□ -1.14
CSDE1-214ENST00000530886 ZNF112Q9UJU3 913 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 TINAGQ9UJW2 476 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 CMAHPQ9Y471 501 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 SNX8Q9Y5X2 465 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 V9GYQ6 96 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 SCN1AP35498 2009 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 MPTX1A8MV57 137 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 A8MXK9 166 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 GNGT2O14610 69 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 CD3EAPO15446 510 aaKnown RBP7.93□□□□□ -1.14
CSDE1-214ENST00000530886 ATP6AP2O75787 350 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 PTBP1P26599 531 aaKnown RBP eCLIP7.93□□□□□ -1.144e-9■■■■■ 37.3
CSDE1-214ENST00000530886 HOXA9P31269 272 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 NUP62P37198 522 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-214ENST00000530886 MAP2K3P46734 347 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 IFRD2Q12894 506 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-214ENST00000530886 EXOSC2Q13868 293 aaKnown RBP7.93□□□□□ -1.14
CSDE1-214ENST00000530886 POU4F3Q15319 338 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 SMN1Q16637 294 aaKnown RBP7.93□□□□□ -1.14
CSDE1-214ENST00000530886 PDZK1Q5T2W1 519 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 MACC1Q6ZN28 852 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 GPR155Q7Z3F1 870 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 CCDC71Q8IV32 467 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-214ENST00000530886 NIM1KQ8IY84 436 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 CCDC36Q8IYA8 594 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 TMEM130Q8N3G9 435 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 LRRC71Q8N4P6 559 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 TWIST2Q8WVJ9 160 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 HGDQ93099 445 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 ZNF583Q96ND8 569 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 P2RY13Q9BPV8 354 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 NIFKQ9BYG3 293 aaKnown RBP7.93□□□□□ -1.14
CSDE1-214ENST00000530886 RACGAP1Q9H0H5 632 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 RNF167Q9H6Y7 350 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 POLG2Q9UHN1 485 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 INVSQ9Y283 1065 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 NEMP2A6NFY4 417 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 SLC22A3O75751 556 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 RGS20O76081 388 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 MICAL2O94851 1124 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 OR4F21O95013 312 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 ARSBP15848 533 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 ARL2P36404 184 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 AVPR1AP37288 418 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 DAPP51397 102 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 POLR2JP52435 117 aaKnown RBP7.93□□□□□ -1.14
CSDE1-214ENST00000530886 GTF2A2P52657 109 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 HOXC5Q00444 222 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 FUT11Q495W5 492 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 TRIM60Q495X7 471 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 UNC50Q53HI1 259 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 MPP7Q5T2T1 576 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 OR4F3Q6IEY1 312 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 LRRC8DQ7L1W4 858 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 GPR149Q86SP6 731 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 ZFAND4Q86XD8 727 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 TIGD4Q8IY51 512 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 DNAJC22Q8N4W6 341 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 C7orf31Q8N865 590 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 ZNF548Q8NEK5 533 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-214ENST00000530886 RAET1EQ8TD07 263 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 ZNF431Q8TF32 576 aaPredicted RBP7.93□□□□□ -1.14
CSDE1-214ENST00000530886 DNASE1L2Q92874 299 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 QRFPRQ96P65 431 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 KCNS3Q9BQ31 491 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 RTP3Q9BQQ7 232 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 GSX2Q9BZM3 304 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 GHITMQ9H3K2 345 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 FOLH1BQ9HBA9 442 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 DCAF13Q9NV06 445 aaKnown RBP7.93□□□□□ -1.14
CSDE1-214ENST00000530886 MCUBQ9NWR8 336 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 TMX2Q9Y320 296 aa7.93□□□□□ -1.14
CSDE1-214ENST00000530886 PLXNB2O15031 1838 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 CLCA1A8K7I4 914 aa7.92□□□□□ -1.14
CSDE1-214ENST00000530886 QSOX1O00391 747 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms