RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 SERPINC1P01008 464 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 CD1EP15812 388 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 RAB28P51157 221 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 EMP2P54851 167 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 TFDP2Q14188 446 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 GRB7Q14451 532 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 TAZQ16635 292 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 TCTE1Q5JU00 501 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 YOD1Q5VVQ6 348 aaPredicted RBP18.06■□□□□ 0.48
SSRP1-204ENST00000529002 NEK10Q6ZWH5 1172 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 SPPL2CQ8IUH8 684 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 VRK3Q8IV63 474 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 ACBD4Q8NC06 268 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 CFAP61Q8NHU2 1237 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 P3H4Q92791 437 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 MAGED4Q96JG8 741 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 CAPN11Q9UMQ6 739 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 PCDHGB6Q9Y5F9 930 aa18.06■□□□□ 0.48
SSRP1-204ENST00000529002 A0A0J9YVX5 310 aa18.05■□□□□ 0.48
SSRP1-204ENST00000529002 KRT87PA6NCN2 255 aa18.05■□□□□ 0.48
SSRP1-204ENST00000529002 OR51F1A6NGY5 319 aa18.05■□□□□ 0.48
SSRP1-204ENST00000529002 IDSB3KWA1 339 aa18.05■□□□□ 0.48
SSRP1-204ENST00000529002 ANXA9O76027 345 aa18.05■□□□□ 0.48
SSRP1-204ENST00000529002 EIF2S1P05198 315 aaKnown RBP18.05■□□□□ 0.48
SSRP1-204ENST00000529002 TMEM253P0C7T8 217 aa18.05■□□□□ 0.48
SSRP1-204ENST00000529002 CD99P14209 185 aa18.05■□□□□ 0.48
SSRP1-204ENST00000529002 PSMB5P28074 263 aa18.05■□□□□ 0.48
SSRP1-204ENST00000529002 EFNA3P52797 238 aa18.05■□□□□ 0.48
SSRP1-204ENST00000529002 ZNF33BQ06732 778 aa18.05■□□□□ 0.48
SSRP1-204ENST00000529002 SF1Q15637 639 aaKnown RBP18.05■□□□□ 0.48
SSRP1-204ENST00000529002 FAM214AQ32MH5 1076 aa18.05■□□□□ 0.48
SSRP1-204ENST00000529002 ZNF766Q5HY98 468 aa18.05■□□□□ 0.48
SSRP1-204ENST00000529002 ZC3H12BQ5HYM0 836 aaKnown RBP18.05■□□□□ 0.48
SSRP1-204ENST00000529002 TMUB1Q9BVT8 246 aa18.05■□□□□ 0.48
SSRP1-204ENST00000529002 YIPF2Q9BWQ6 316 aa18.05■□□□□ 0.48
SSRP1-204ENST00000529002 DDX56Q9NY93 547 aaKnown RBP18.05■□□□□ 0.48
SSRP1-204ENST00000529002 LCMT1Q9UIC8 334 aa18.05■□□□□ 0.48
SSRP1-204ENST00000529002 TRHDEQ9UKU6 1024 aa18.05■□□□□ 0.48
SSRP1-204ENST00000529002 NPIPA5E9PKD4 350 aa18.04■□□□□ 0.48
SSRP1-204ENST00000529002 AP2A2O94973 939 aa18.04■□□□□ 0.48
SSRP1-204ENST00000529002 TPH1P17752 444 aa18.04■□□□□ 0.48
SSRP1-204ENST00000529002 CD9P21926 228 aa18.04■□□□□ 0.48
SSRP1-204ENST00000529002 FBLP22087 321 aaKnown RBP18.04■□□□□ 0.48
SSRP1-204ENST00000529002 FDXRP22570 491 aa18.04■□□□□ 0.48
SSRP1-204ENST00000529002 HSF1Q00613 529 aa18.04■□□□□ 0.48
SSRP1-204ENST00000529002 PCOLCEQ15113 449 aa18.04■□□□□ 0.48
SSRP1-204ENST00000529002 SYTL3Q4VX76 610 aa18.04■□□□□ 0.48
SSRP1-204ENST00000529002 ABHD17BQ5VST6 288 aa18.04■□□□□ 0.48
SSRP1-204ENST00000529002 LRRC38Q5VT99 294 aa18.04■□□□□ 0.48
SSRP1-204ENST00000529002 FCRLBQ6BAA4 426 aa18.04■□□□□ 0.48
SSRP1-204ENST00000529002 Q6ZPB1 254 aaPredicted RBP18.04■□□□□ 0.48
SSRP1-204ENST00000529002 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.04■□□□□ 0.48
SSRP1-204ENST00000529002 SUN3Q8TAQ9 357 aa18.04■□□□□ 0.48
SSRP1-204ENST00000529002 C10orf90Q96M02 699 aa18.04■□□□□ 0.48
SSRP1-204ENST00000529002 GPR137Q96N19 417 aa18.04■□□□□ 0.48
SSRP1-204ENST00000529002 RNF32Q9H0A6 362 aa18.04■□□□□ 0.48
SSRP1-204ENST00000529002 KLHL1Q9NR64 748 aa18.04■□□□□ 0.48
SSRP1-204ENST00000529002 STMN3Q9NZ72 180 aa18.04■□□□□ 0.48
SSRP1-204ENST00000529002 IL1RAPL1Q9NZN1 696 aa18.04■□□□□ 0.48
SSRP1-204ENST00000529002 NPIPA1Q9UND3 350 aa18.04■□□□□ 0.48
SSRP1-204ENST00000529002 SCN3AQ9NY46 2000 aa18.03■□□□□ 0.48
SSRP1-204ENST00000529002 IGLV3-12A0A075B6K2 115 aa18.03■□□□□ 0.48
SSRP1-204ENST00000529002 H7C0C1 242 aa18.03■□□□□ 0.48
SSRP1-204ENST00000529002 GYPCP04921 128 aa18.03■□□□□ 0.48
SSRP1-204ENST00000529002 COMTP21964 271 aa18.03■□□□□ 0.48
SSRP1-204ENST00000529002 CXCR2P25025 360 aa18.03■□□□□ 0.48
SSRP1-204ENST00000529002 ATP5OP48047 213 aa18.03■□□□□ 0.48
SSRP1-204ENST00000529002 YBX1P67809 324 aaKnown RBP18.03■□□□□ 0.48
SSRP1-204ENST00000529002 CACNG1Q06432 222 aa18.03■□□□□ 0.48
SSRP1-204ENST00000529002 SLC18A3Q16572 532 aa18.03■□□□□ 0.48
SSRP1-204ENST00000529002 AGAP11Q8TF27 550 aa18.03■□□□□ 0.48
SSRP1-204ENST00000529002 SDCCAG3Q96C92 435 aa18.03■□□□□ 0.48
SSRP1-204ENST00000529002 CDKN2AIPNLQ96HQ2 116 aa18.03■□□□□ 0.48
SSRP1-204ENST00000529002 TBL1YQ9BQ87 522 aa18.03■□□□□ 0.48
SSRP1-204ENST00000529002 GOLPH3Q9H4A6 298 aa18.03■□□□□ 0.48
SSRP1-204ENST00000529002 GPAMQ9HCL2 828 aa18.03■□□□□ 0.48
SSRP1-204ENST00000529002 LUC7LQ9NQ29 371 aaKnown RBP18.03■□□□□ 0.48
SSRP1-204ENST00000529002 PIH1D1Q9NWS0 290 aaKnown RBP18.03■□□□□ 0.48
SSRP1-204ENST00000529002 TRPC4Q9UBN4 977 aa18.03■□□□□ 0.48
SSRP1-204ENST00000529002 LUC7L2Q9Y383 392 aaKnown RBP18.03■□□□□ 0.48
SSRP1-204ENST00000529002 hCG_1818297A0A087WSY0 165 aa18.02■□□□□ 0.48
SSRP1-204ENST00000529002 SMTNL1A8MU46 457 aa18.02■□□□□ 0.48
SSRP1-204ENST00000529002 A8MUI8 341 aa18.02■□□□□ 0.48
SSRP1-204ENST00000529002 OR1I1O60431 355 aa18.02■□□□□ 0.48
SSRP1-204ENST00000529002 GSTM1P09488 218 aa18.02■□□□□ 0.48
SSRP1-204ENST00000529002 MARCKSL1P49006 195 aa18.02■□□□□ 0.48
SSRP1-204ENST00000529002 GSTM4Q03013 218 aa18.02■□□□□ 0.48
SSRP1-204ENST00000529002 SYT16Q17RD7 645 aa18.02■□□□□ 0.48
SSRP1-204ENST00000529002 ASTE1Q2TB18 679 aaPredicted RBP18.02■□□□□ 0.48
SSRP1-204ENST00000529002 TMTC1Q8IUR5 882 aa18.02■□□□□ 0.48
SSRP1-204ENST00000529002 SHISA5Q8N114 240 aa18.02■□□□□ 0.48
SSRP1-204ENST00000529002 OR2L8Q8NGY9 312 aa18.02■□□□□ 0.48
SSRP1-204ENST00000529002 LKAAEAR1Q8TD35 194 aa18.02■□□□□ 0.48
SSRP1-204ENST00000529002 SIGLEC12Q96PQ1 595 aa18.02■□□□□ 0.48
SSRP1-204ENST00000529002 FAM118BQ9BPY3 351 aa18.02■□□□□ 0.48
SSRP1-204ENST00000529002 TREX2Q9BQ50 279 aaPredicted RBP18.02■□□□□ 0.48
SSRP1-204ENST00000529002 BPIFA3Q9BQP9 254 aa18.02■□□□□ 0.48
SSRP1-204ENST00000529002 HEMGNQ9BXL5 484 aa18.02■□□□□ 0.48
SSRP1-204ENST00000529002 NAT10Q9H0A0 1025 aaKnown RBP18.02■□□□□ 0.48
SSRP1-204ENST00000529002 GSX1Q9H4S2 264 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms