RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 LDB1Q86U70 411 aaPredicted RBP8.19□□□□□ -1.1
SSBP3-212ENST00000528930 BIVMQ86UB2 503 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 FAM129CQ86XR2 697 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 MPP5Q8N3R9 675 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 PHC3Q8NDX5 983 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 CHDHQ8NE62 594 aaPredicted RBP8.19□□□□□ -1.1
SSBP3-212ENST00000528930 ZNF417Q8TAU3 575 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 MFSD3Q96ES6 412 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 ZNF587Q96SQ5 575 aaPredicted RBP8.19□□□□□ -1.1
SSBP3-212ENST00000528930 NAP1L3Q99457 506 aaPredicted RBP8.19□□□□□ -1.1
SSBP3-212ENST00000528930 NRTNQ99748 197 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 CTRCQ99895 268 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 ASPSCR1Q9BZE9 553 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 KIR3DX1Q9H7L2 352 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 MRM3Q9HC36 420 aaKnown RBP8.19□□□□□ -1.1
SSBP3-212ENST00000528930 MCCC2Q9HCC0 563 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 CATSPERZQ9NTU4 200 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 SLC39A1Q9NY26 324 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 PSD3Q9NYI0 1048 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 MARCH4Q9P2E8 410 aaPredicted RBP8.19□□□□□ -1.1
SSBP3-212ENST00000528930 SOX13Q9UN79 622 aa8.19□□□□□ -1.1
SSBP3-212ENST00000528930 MRPS18BQ9Y676 258 aaKnown RBP8.19□□□□□ -1.1
SSBP3-212ENST00000528930 MAP1AP78559 2803 aaPredicted RBP8.18□□□□□ -1.1
SSBP3-212ENST00000528930 IGHV5-51A0A0C4DH38 117 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 TMEM229AB2RXF0 380 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 QSOX1O00391 747 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 LIN7AO14910 233 aaPredicted RBP8.18□□□□□ -1.1
SSBP3-212ENST00000528930 FANCGO15287 622 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 CD3EAPO15446 510 aaKnown RBP8.18□□□□□ -1.1
SSBP3-212ENST00000528930 OR56A5P0C7T3 313 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 TPBGLP0DKB5 382 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 MLNP12872 115 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 H2AFXP16104 143 aaPredicted RBP8.18□□□□□ -1.1
SSBP3-212ENST00000528930 TCP1P17987 556 aaKnown RBP8.18□□□□□ -1.1
SSBP3-212ENST00000528930 NELFEP18615 380 aaKnown RBP8.18□□□□□ -1.1
SSBP3-212ENST00000528930 ACADLP28330 430 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 NDUFS1P28331 727 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 CCR7P32248 378 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 MAGEA3P43357 314 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 ARCN1P48444 511 aaKnown RBP8.18□□□□□ -1.1
SSBP3-212ENST00000528930 FNTAP49354 379 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 SEPHS1P49903 392 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 GNG11P61952 73 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 PPP2R2AP63151 447 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 TUBB4BP68371 445 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 BOP1Q14137 746 aaKnown RBP8.18□□□□□ -1.1
SSBP3-212ENST00000528930 PLCL1Q15111 1095 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 TEX35Q5T0J7 233 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 DCAF12Q5T6F0 453 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 CACHD1Q5VU97 1274 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 IRGCQ6NXR0 463 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 KLHL35Q6PF15 583 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 ZNF517Q6ZMY9 492 aaPredicted RBP8.18□□□□□ -1.1
SSBP3-212ENST00000528930 FAM92BQ6ZTR7 304 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 CREG2Q8IUH2 290 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 AGGF1Q8N302 714 aaeCLIP8.18□□□□□ -1.1
SSBP3-212ENST00000528930 NAT8LQ8N9F0 302 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 LRRN4CLQ8ND94 238 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 ST6GALNAC3Q8NDV1 305 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 MCUQ8NE86 351 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 OR4E2Q8NGC2 313 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 LKAAEAR1Q8TD35 194 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 ITLN2Q8WWU7 325 aaPredicted RBP8.18□□□□□ -1.1
SSBP3-212ENST00000528930 ELMO1Q92556 727 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 TFGQ92734 400 aaPredicted RBP8.18□□□□□ -1.1
SSBP3-212ENST00000528930 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.18□□□□□ -1.1
SSBP3-212ENST00000528930 ZDHHC12Q96GR4 267 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 SLC41A2Q96JW4 573 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 SERPINB12Q96P63 405 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 FERD3LQ96RJ6 166 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 TTC1Q99614 292 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 MAP3K3Q99759 626 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 TRIM56Q9BRZ2 755 aaKnown RBP8.18□□□□□ -1.1
SSBP3-212ENST00000528930 SLC25A23Q9BV35 468 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 CARD6Q9BX69 1037 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 DDX47Q9H0S4 455 aaKnown RBP8.18□□□□□ -1.1
SSBP3-212ENST00000528930 P2RY12Q9H244 342 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 TFB2MQ9H5Q4 396 aaKnown RBP8.18□□□□□ -1.1
SSBP3-212ENST00000528930 VPS37BQ9H9H4 285 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 HRASLS2Q9NWW9 162 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 ANAPC5Q9UJX4 755 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 CDYLQ9Y232 598 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 PCDHGB7Q9Y5F8 929 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 HEBP2Q9Y5Z4 205 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 COLEC10Q9Y6Z7 277 aa8.18□□□□□ -1.1
SSBP3-212ENST00000528930 OR6C74A6NCV1 312 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 A6NJY4 79 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 IQCF5A8MTL0 148 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 GOLGA8KD6RF30 607 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 GOLGA8TH3BQL2 631 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 GOLGA8MH3BSY2 632 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 IFRD1O00458 451 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-212ENST00000528930 BTN3A3O00478 584 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 PRMT5O14744 637 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-212ENST00000528930 POLR1CO15160 346 aaPredicted RBP8.17□□□□□ -1.1
SSBP3-212ENST00000528930 DPM1O60762 260 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 GPC4O75487 556 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 RASSF9O75901 435 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 VAPBO95292 243 aa8.17□□□□□ -1.1
SSBP3-212ENST00000528930 SLU7O95391 586 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms