RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 ASMTP46597 345 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 LRRC74AQ0VAA2 488 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 DOC2AQ14183 400 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 ARHGAP19Q14CB8 494 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 LRRC36Q1X8D7 754 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 FAM174BQ3ZCQ3 159 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 ATG9BQ674R7 924 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 ZNF776Q68DI1 518 aaPredicted RBP14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 NOXRED1Q6NXP6 359 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 CYP2R1Q6VVX0 501 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 LPCAT2Q7L5N7 544 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 ERMP1Q7Z2K6 904 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 TRMT11Q7Z4G4 463 aaKnown RBP14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 LRRTM4Q86VH4 590 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 AMZ2Q86W34 360 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 TBC1D21Q8IYX1 336 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 CHPFQ8IZ52 775 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 LILRA2Q8N149 483 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 PACRGLQ8N7B6 248 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 ZNF513Q8N8E2 541 aaPredicted RBP14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 PAPD5Q8NDF8 572 aaKnown RBP14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 TRPV3Q8NET8 790 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 OR52E4Q8NGH9 312 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 EME1Q96AY2 570 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 RAD51AP1Q96B01 352 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 SLCO4A1Q96BD0 722 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 MED8Q96G25 268 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 ITCHQ96J02 903 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 CCDC115Q96NT0 180 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 OR52E6Q96RD3 313 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 SGPP1Q9BX95 441 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 SIRT5Q9NXA8 310 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 HCN2Q9UL51 889 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 TSC22D4Q9Y3Q8 395 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 CKAP5Q14008 2032 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 COL4A3Q01955 1670 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 A0A096LPI6 279 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 FOXE1O00358 373 aaPredicted RBP14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 KMOO15229 486 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 SLC16A8O95907 504 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 ATP6V1B2P21281 511 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 KELP23276 732 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 FASP25445 335 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 PBLDP30039 288 aaPredicted RBP14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 DRD3P35462 400 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 BDKRB1P46663 353 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 TRPC1P48995 793 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 GALK1P51570 392 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 DGKQP52824 942 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 ATXN3P54252 364 aaPredicted RBP14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 AQP4P55087 323 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 SFSWAPQ12872 951 aaKnown RBP14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 PTGR1Q14914 329 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 RUNDC3AQ59EK9 446 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 RABL3Q5HYI8 236 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 LRIF1Q5T3J3 769 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 MED27Q6P2C8 311 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 PARM1Q6UWI2 310 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 SUSD1Q6UWL2 747 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 SPPL2CQ8IUH8 684 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 TMEM132CQ8N3T6 1108 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 OXR1Q8N573 874 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 CANT1Q8WVQ1 401 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 PPWD1Q96BP3 646 aaKnown RBP14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 NECTIN4Q96NY8 510 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 KXD1Q9BQD3 176 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 C1QTNF7Q9BXJ2 289 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 TEX101Q9BY14 249 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 YY1AP1Q9H869 796 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 GORASP2Q9H8Y8 452 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 RMI1Q9H9A7 625 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 SGK2Q9HBY8 427 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 PDP2Q9P2J9 529 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 GULP1Q9UBP9 304 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 SCML1Q9UN30 329 aa14.32□□□□□ -0.12
ECHDC1-220ENST00000528402 K7ESM1 405 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 MID1O15344 667 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 LINC01565O15544 149 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 PRAMEF4O60810 478 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 PCDH8O95206 1070 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 TRIM23P36406 574 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 NEK2P51955 445 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 PHEXP78562 749 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 CDK3Q00526 305 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 FOLH1Q04609 750 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 SPIN4Q56A73 249 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 SPANXN4Q5MJ08 99 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 TBCELQ5QJ74 424 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 AGBL4Q5VU57 503 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 PRAMEF9Q5VWM5 478 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 GLYATQ6IB77 296 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 KIAA1161Q6NSJ0 714 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 SLCO4C1Q6ZQN7 724 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 PDZD3Q86UT5 571 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 GPR180Q86V85 440 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 ZNF547Q8IVP9 402 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 SFTPA1Q8IWL2 248 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 SYTL1Q8IYJ3 562 aa14.31□□□□□ -0.12
ECHDC1-220ENST00000528402 HDDC3Q8N4P3 179 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms