RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 A0A1W2PRB8 838 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 CPED1A4D0V7 1026 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 SEMA4FO95754 770 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 ZDHHC11BP0C7U3 371 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 VARSP26640 1264 aaKnown RBP14.67□□□□□ -0.06
USP47-207ENST00000527733 CCR10P46092 362 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 IDH2P48735 452 aaKnown RBP14.67□□□□□ -0.06
USP47-207ENST00000527733 NKX3-2P78367 333 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 C1DQ13901 141 aaKnown RBP14.67□□□□□ -0.06
USP47-207ENST00000527733 SUZ12Q15022 739 aaKnown RBP14.67□□□□□ -0.06
USP47-207ENST00000527733 DPPA4Q7L190 304 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 PACS2Q86VP3 889 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 ADGRG2Q8IZP9 1017 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 C8orf59Q8N0T1 100 aaPredicted RBP14.67□□□□□ -0.06
USP47-207ENST00000527733 GPR26Q8NDV2 337 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 TMIEQ8NEW7 156 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 FATE1Q969F0 183 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 MRPL48Q96GC5 212 aaKnown RBP14.67□□□□□ -0.06
USP47-207ENST00000527733 OR5K4A6NMS3 321 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 CDKN1CP49918 316 aaPredicted RBP14.67□□□□□ -0.06
USP47-207ENST00000527733 ZNF140P52738 457 aaPredicted RBP14.67□□□□□ -0.06
USP47-207ENST00000527733 SPIBQ01892 262 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 EMX2Q04743 252 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 EMC10Q5UCC4 262 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 C1orf53Q5VUE5 145 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 PIANPQ8IYJ0 282 aa14.67□□□□□ -0.06
USP47-207ENST00000527733 NDUFS4O43181 175 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 ZNF217O75362 1048 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 TIPRLO75663 272 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 OR6A2O95222 327 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 GALK1P51570 392 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 ELOCQ15369 112 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 RFX4Q33E94 735 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 UNC50Q53HI1 259 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 UBAP2Q5T6F2 1119 aaKnown RBP14.66□□□□□ -0.06
USP47-207ENST00000527733 ANKRD54Q6NXT1 300 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 DEF8Q6ZN54 512 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 GMEB2Q9UKD1 530 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 A0A0U1RQS6 177 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 GPIP06744 558 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 PAICSP22234 425 aaKnown RBP14.66□□□□□ -0.06
USP47-207ENST00000527733 FOXM1Q08050 763 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 DLG1Q12959 904 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 PARS2Q7L3T8 475 aaKnown RBP14.66□□□□□ -0.06
USP47-207ENST00000527733 GPR149Q86SP6 731 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 ZNF605Q86T29 641 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 ISCA2Q86U28 154 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 EPB41L4BQ9H329 900 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 FAM53CQ9NYF3 392 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 KLK1P06870 262 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 CDH1P12830 882 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 AOC1P19801 751 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 ADRA1AP35348 466 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 SGSHP51688 502 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 ZIK1Q3SY52 487 aaPredicted RBP14.66□□□□□ -0.06
USP47-207ENST00000527733 LIPIQ6XZB0 460 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 MACC1Q6ZN28 852 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 KNL1Q8NG31 2342 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 NSUN5Q96P11 429 aaKnown RBP14.66□□□□□ -0.06
USP47-207ENST00000527733 TEFMQ96QE5 360 aaKnown RBP14.66□□□□□ -0.06
USP47-207ENST00000527733 MVB12BQ9H7P6 319 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 POLR1BQ9H9Y6 1135 aa14.66□□□□□ -0.06
USP47-207ENST00000527733 OR10H3O60404 316 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 ATXN1LP0C7T5 689 aaKnown RBP14.65□□□□□ -0.06
USP47-207ENST00000527733 TIMP2P16035 220 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 GMPRP36959 345 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 GRIN2CQ14957 1233 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 LIPJQ5W064 366 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 KCTD11Q693B1 232 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 ABHD13Q7L211 337 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 TDHQ8IZJ6 230 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 ZNF689Q96CS4 500 aaPredicted RBP14.65□□□□□ -0.06
USP47-207ENST00000527733 LRRC3Q9BY71 257 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 OR51B5Q9H339 312 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 RAPGEFL1Q9UHV5 662 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 CNOT6Q9ULM6 557 aaKnown RBP14.65□□□□□ -0.06
USP47-207ENST00000527733 SH3GLB1Q9Y371 365 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 CSNK2A2P19784 350 aaPredicted RBP14.65□□□□□ -0.06
USP47-207ENST00000527733 S100A5P33763 92 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 NCF4Q15080 339 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 PNPLA1Q8N8W4 532 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 CDC14AQ9UNH5 594 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 POMPQ9Y244 141 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 IGLV3-25P01717 112 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 MPIP34949 423 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 MTPNP58546 118 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 CDC42P60953 191 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 RPS13P62277 151 aaKnown RBP14.65□□□□□ -0.06
USP47-207ENST00000527733 ZNF155Q12901 538 aaPredicted RBP14.65□□□□□ -0.06
USP47-207ENST00000527733 SLC13A2Q13183 592 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 INAVAQ3KP66 663 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 PRRT3Q5FWE3 981 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 MTX3Q5HYI7 312 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 PHTF2Q8N3S3 785 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 CHCHD4Q8N4Q1 142 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 OR13J1Q8NGT2 312 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 EPS8L2Q9H6S3 715 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 LMAN1LQ9HAT1 526 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 FZD3Q9NPG1 666 aa14.65□□□□□ -0.06
USP47-207ENST00000527733 ARHGEF3Q9NR81 526 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms