RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 TBPL1P62380 186 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 HSD11B2P80365 405 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 ABATP80404 500 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 ZNF844Q08AG5 666 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 RTP5Q14D33 572 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 TECRLQ5HYJ1 363 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 CAPN13Q6MZZ7 669 aaPredicted RBP20.01■□□□□ 0.79
CD44-222ENST00000526025 CYB5D1Q6P9G0 228 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 SH2D5Q6ZV89 423 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 CYP4X1Q8N118 509 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 PLD6Q8N2A8 252 aaKnown RBP20.01■□□□□ 0.79
CD44-222ENST00000526025 D2HGDHQ8N465 521 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 OR2L3Q8NG85 312 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 RHBDF1Q96CC6 855 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 UNKQ9C0B0 810 aaKnown RBP20.01■□□□□ 0.79
CD44-222ENST00000526025 PCMTD2Q9NV79 361 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 SIDT1Q9NXL6 827 aaKnown RBP20.01■□□□□ 0.79
CD44-222ENST00000526025 ANKMY1Q9P2S6 941 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 TMCO1Q9UM00 188 aa20.01■□□□□ 0.79
CD44-222ENST00000526025 TLDC2A0PJX2 215 aa20■□□□□ 0.79
CD44-222ENST00000526025 A8MU76 341 aa20■□□□□ 0.79
CD44-222ENST00000526025 TARM1B6A8C7 271 aa20■□□□□ 0.79
CD44-222ENST00000526025 MAP3K7O43318 606 aa20■□□□□ 0.79
CD44-222ENST00000526025 DXOO77932 396 aaKnown RBP20■□□□□ 0.79
CD44-222ENST00000526025 GUCA1CO95843 209 aa20■□□□□ 0.79
CD44-222ENST00000526025 H2AFXP16104 143 aaPredicted RBP20■□□□□ 0.79
CD44-222ENST00000526025 HRH2P25021 359 aa20■□□□□ 0.79
CD44-222ENST00000526025 CMPK1P30085 196 aa20■□□□□ 0.79
CD44-222ENST00000526025 PRDX1Q06830 199 aaKnown RBP20■□□□□ 0.79
CD44-222ENST00000526025 SF1Q15637 639 aaKnown RBP20■□□□□ 0.79
CD44-222ENST00000526025 SULT1C3Q6IMI6 304 aa20■□□□□ 0.79
CD44-222ENST00000526025 LCTLQ6UWM7 567 aa20■□□□□ 0.79
CD44-222ENST00000526025 TAX1BP1Q86VP1 789 aa20■□□□□ 0.79
CD44-222ENST00000526025 FBXO39Q8N4B4 442 aa20■□□□□ 0.79
CD44-222ENST00000526025 C2orf73Q8N5S3 287 aaPredicted RBP20■□□□□ 0.79
CD44-222ENST00000526025 BMPERQ8N8U9 685 aa20■□□□□ 0.79
CD44-222ENST00000526025 ZUFSPQ96AP4 578 aa20■□□□□ 0.79
CD44-222ENST00000526025 NXPE2Q96DL1 559 aa20■□□□□ 0.79
CD44-222ENST00000526025 MIPEPQ99797 713 aa20■□□□□ 0.79
CD44-222ENST00000526025 EGFL8Q99944 293 aa20■□□□□ 0.79
CD44-222ENST00000526025 MRPL57Q9BQC6 102 aaKnown RBP20■□□□□ 0.79
CD44-222ENST00000526025 HAUS8Q9BT25 410 aa20■□□□□ 0.79
CD44-222ENST00000526025 CNOT10Q9H9A5 744 aaKnown RBP20■□□□□ 0.79
CD44-222ENST00000526025 DCDC2Q9UHG0 476 aa20■□□□□ 0.79
CD44-222ENST00000526025 A0A1W2PNU3 283 aaPredicted RBP19.99■□□□□ 0.79
CD44-222ENST00000526025 MED19A0JLT2 244 aaPredicted RBP19.99■□□□□ 0.79
CD44-222ENST00000526025 SLC9B1P1A6NJY1 282 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 S100BP04271 92 aaPredicted RBP19.99■□□□□ 0.79
CD44-222ENST00000526025 PYGBP11216 843 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 ST6GAL1P15907 406 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 SLC6A12P48065 614 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 KCNC1P48547 511 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 RAB15P59190 212 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 FOXK2Q01167 660 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 NAE1Q13564 534 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 ZXDCQ2QGD7 858 aaPredicted RBP19.99■□□□□ 0.79
CD44-222ENST00000526025 PRAMEF13Q5VWM6 474 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 ICE2Q659A1 982 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 SUSD1Q6UWL2 747 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 TRABD2AQ86V40 505 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 BPHLQ86WA6 291 aaPredicted RBP19.99■□□□□ 0.79
CD44-222ENST00000526025 LSMEM2Q8N112 164 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 C19orf47Q8N9M1 422 aaKnown RBP19.99■□□□□ 0.79
CD44-222ENST00000526025 PPFIBP2Q8ND30 876 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 UBTD2Q8WUN7 234 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 TCTN2Q96GX1 697 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 PRR11Q96HE9 360 aaPredicted RBP19.99■□□□□ 0.79
CD44-222ENST00000526025 PPM1MQ96MI6 270 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 MRPL46Q9H2W6 279 aaKnown RBP19.99■□□□□ 0.79
CD44-222ENST00000526025 PDE7BQ9NP56 450 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 FBXO8Q9NRD0 319 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 MKS1Q9NXB0 559 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 CD274Q9NZQ7 290 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 PTBP2Q9UKA9 531 aaKnown RBP19.99■□□□□ 0.79
CD44-222ENST00000526025 SATB2Q9UPW6 733 aa19.99■□□□□ 0.79
CD44-222ENST00000526025 A0A1W2PPM1 405 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 KLK8O60259 260 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 MTHFD2P13995 350 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 PSMB5P28074 263 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 GLRBP48167 497 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 ARL4DP49703 201 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 MC2RQ01718 297 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 ACY1Q03154 408 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 RELAQ04206 551 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 SLC18A2Q05940 514 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 C3orf38Q5JPI3 329 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 TMTC4Q5T4D3 741 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 KIAA1614Q5VZ46 1190 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 METTL2BQ6P1Q9 378 aaKnown RBP19.98■□□□□ 0.79
CD44-222ENST00000526025 TRIM73Q86UV7 250 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 MARCH9Q86YJ5 346 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 MED8Q96G25 268 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 ZIM3Q96PE6 472 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 ATG10Q9H0Y0 220 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 SENP1Q9P0U3 644 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 TAC3Q9UHF0 121 aa19.98■□□□□ 0.79
CD44-222ENST00000526025 MDC1Q14676 2089 aaKnown RBP19.98■□□□□ 0.79
CD44-222ENST00000526025 EFCAB7A8K855 629 aa19.97■□□□□ 0.79
CD44-222ENST00000526025 GLRA3O75311 464 aa19.97■□□□□ 0.79
CD44-222ENST00000526025 JMJD7P0C870 316 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms