RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 ZBTB11O95625 1053 aaPredicted RBP18.06■□□□□ 0.48
PTPRK-218ENST00000525459 HOXB3P14651 431 aaPredicted RBP18.06■□□□□ 0.48
PTPRK-218ENST00000525459 TAC1P20366 129 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 CMPK1P30085 196 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 PEBP1P30086 187 aaKnown RBP18.06■□□□□ 0.48
PTPRK-218ENST00000525459 SF1Q15637 639 aaKnown RBP18.06■□□□□ 0.48
PTPRK-218ENST00000525459 TNFAIP8L3Q5GJ75 292 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 THEMIS2Q5TEJ8 643 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 CACHD1Q5VU97 1274 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 LCTLQ6UWM7 567 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 FAM92BQ6ZTR7 304 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 ARHGAP22Q7Z5H3 698 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 OR2A1Q8NGT9 310 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 FLVCR1-AS1Q8TAF5 88 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 UBTD2Q8WUN7 234 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 EXT2Q93063 718 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 MED8Q96G25 268 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 CENPHQ9H3R5 247 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 SEMA6CQ9H3T2 930 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 SSU72Q9NP77 194 aaKnown RBP18.06■□□□□ 0.48
PTPRK-218ENST00000525459 TMEM9Q9P0T7 183 aa18.06■□□□□ 0.48
PTPRK-218ENST00000525459 KNTC1P50748 2209 aa18.05■□□□□ 0.48
PTPRK-218ENST00000525459 KLK8O60259 260 aa18.05■□□□□ 0.48
PTPRK-218ENST00000525459 GFAPP14136 432 aa18.05■□□□□ 0.48
PTPRK-218ENST00000525459 HRH2P25021 359 aa18.05■□□□□ 0.48
PTPRK-218ENST00000525459 ALDH18A1P54886 795 aaKnown RBP18.05■□□□□ 0.48
PTPRK-218ENST00000525459 NAE1Q13564 534 aa18.05■□□□□ 0.48
PTPRK-218ENST00000525459 FASTKQ14296 549 aaKnown RBP18.05■□□□□ 0.48
PTPRK-218ENST00000525459 N4BP2L1Q5TBK1 243 aaPredicted RBP18.05■□□□□ 0.48
PTPRK-218ENST00000525459 TAX1BP1Q86VP1 789 aa18.05■□□□□ 0.48
PTPRK-218ENST00000525459 C4orf33Q8N1A6 199 aa18.05■□□□□ 0.48
PTPRK-218ENST00000525459 FBXO39Q8N4B4 442 aa18.05■□□□□ 0.48
PTPRK-218ENST00000525459 AGBL5Q8NDL9 886 aa18.05■□□□□ 0.48
PTPRK-218ENST00000525459 OR2L3Q8NG85 312 aa18.05■□□□□ 0.48
PTPRK-218ENST00000525459 RDH11Q8TC12 318 aa18.05■□□□□ 0.48
PTPRK-218ENST00000525459 MAP3K3Q99759 626 aa18.05■□□□□ 0.48
PTPRK-218ENST00000525459 CMKLR1Q99788 373 aa18.05■□□□□ 0.48
PTPRK-218ENST00000525459 CHRNA10Q9GZZ6 450 aa18.05■□□□□ 0.48
PTPRK-218ENST00000525459 ZNF358Q9NW07 568 aa18.05■□□□□ 0.48
PTPRK-218ENST00000525459 KLHL3Q9UH77 587 aa18.05■□□□□ 0.48
PTPRK-218ENST00000525459 PTBP2Q9UKA9 531 aaKnown RBP18.05■□□□□ 0.48
PTPRK-218ENST00000525459 KLK4Q9Y5K2 254 aa18.05■□□□□ 0.48
PTPRK-218ENST00000525459 TNPO3Q9Y5L0 923 aaKnown RBP18.05■□□□□ 0.48
PTPRK-218ENST00000525459 CCDC187A0A096LP49 1063 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 NCF1BA6NI72 391 aaPredicted RBP18.04■□□□□ 0.48
PTPRK-218ENST00000525459 NCF1CA8MVU1 366 aaPredicted RBP18.04■□□□□ 0.48
PTPRK-218ENST00000525459 UBXN8O00124 270 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 TK2O00142 265 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 TOP3BO95985 862 aaKnown RBP18.04■□□□□ 0.48
PTPRK-218ENST00000525459 MTHFD2P13995 350 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 NCF1P14598 390 aaPredicted RBP18.04■□□□□ 0.48
PTPRK-218ENST00000525459 CSTF2P33240 577 aaKnown RBP eCLIP18.04■□□□□ 0.483e-7■■■□□ 17.7
PTPRK-218ENST00000525459 SLC6A12P48065 614 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 PPP1CAP62136 330 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 PRDX1Q06830 199 aaKnown RBP18.04■□□□□ 0.48
PTPRK-218ENST00000525459 TSTA3Q13630 321 aaPredicted RBP18.04■□□□□ 0.48
PTPRK-218ENST00000525459 ICE2Q659A1 982 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 SUSD1Q6UWL2 747 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 LRRC70Q7Z2Q7 622 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 B3GNT8Q7Z7M8 397 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 BANPQ8N9N5 519 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 PPFIBP2Q8ND30 876 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 KLHL6Q8WZ60 621 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 CCDC126Q96EE4 140 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 SLC41A2Q96JW4 573 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 NRTNQ99748 197 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 CAPS2Q9BXY5 557 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 ATG10Q9H0Y0 220 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 TMEM216Q9P0N5 145 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 TAC3Q9UHF0 121 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 BTRCQ9Y297 605 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 KIF26BQ2KJY2 2108 aa18.04■□□□□ 0.48
PTPRK-218ENST00000525459 TARM1B6A8C7 271 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 STX16-NPEPL1H3BU86 382 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 STX16O14662 325 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 CASC3O15234 703 aaKnown RBP18.03■□□□□ 0.48
PTPRK-218ENST00000525459 ARL4DP49703 201 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 HSD11B2P80365 405 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 NFKB2Q00653 900 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 SETDB1Q15047 1291 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 PTCHD3Q3KNS1 767 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 SNAP47Q5SQN1 464 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 C2orf73Q8N5S3 287 aaPredicted RBP18.03■□□□□ 0.48
PTPRK-218ENST00000525459 GOLGA6L1Q8N7Z2 621 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 ZUFSPQ96AP4 578 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 MRPS30Q9NP92 439 aaKnown RBP18.03■□□□□ 0.48
PTPRK-218ENST00000525459 CPSF2Q9P2I0 782 aaKnown RBP18.03■□□□□ 0.48
PTPRK-218ENST00000525459 MAP2K7O14733 419 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 STK16O75716 305 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 MSL3P1P0C860 447 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 NELFEP18615 380 aaKnown RBP18.03■□□□□ 0.48
PTPRK-218ENST00000525459 KCNC1P48547 511 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 PIK3CGP48736 1102 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 TMTC4Q5T4D3 741 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 C17orf64Q86WR6 236 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 SLC22A9Q8IVM8 553 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 CHCHD4Q8N4Q1 142 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 C19orf47Q8N9M1 422 aaKnown RBP18.03■□□□□ 0.48
PTPRK-218ENST00000525459 TCTN2Q96GX1 697 aa18.03■□□□□ 0.48
PTPRK-218ENST00000525459 TRAPPC9Q96Q05 1148 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms