RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 C8GP07360 202 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 MYBL2P10244 700 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 NELFEP18615 380 aaKnown RBP11.79□□□□□ -0.52
CHKA-203ENST00000525155 SAT1P21673 171 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 SHMT2P34897 504 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 SLC26A3P40879 764 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 CAPZBP47756 277 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 PRKAA1Q13131 559 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 SP140Q13342 867 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 SLC29A2Q14542 456 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 UAP1Q16222 522 aaPredicted RBP11.79□□□□□ -0.52
CHKA-203ENST00000525155 CRTC2Q53ET0 693 aaPredicted RBP11.79□□□□□ -0.52
CHKA-203ENST00000525155 ACSBG2Q5FVE4 666 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 CACHD1Q5VU97 1274 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 ARMC6Q6NXE6 501 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 PAQR3Q6TCH7 311 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 C6orf15Q6UXA7 325 aaPredicted RBP11.79□□□□□ -0.52
CHKA-203ENST00000525155 OOSP2Q86WS3 158 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 VRK3Q8IV63 474 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 GSPT2Q8IYD1 628 aaKnown RBP11.79□□□□□ -0.52
CHKA-203ENST00000525155 ESX1Q8N693 406 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 FBXO15Q8NCQ5 510 aaPredicted RBP11.79□□□□□ -0.52
CHKA-203ENST00000525155 CFAP61Q8NHU2 1237 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 UBLCP1Q8WVY7 318 aaPredicted RBP11.79□□□□□ -0.52
CHKA-203ENST00000525155 ASB11Q8WXH4 323 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 RAD51AP1Q96B01 352 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 FAM136AQ96C01 138 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 MTBPQ96DY7 904 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 ZDHHC12Q96GR4 267 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 SLC41A2Q96JW4 573 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 PAFAH2Q99487 392 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 TRIM54Q9BYV2 358 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 ULBP3Q9BZM4 244 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 RAB33BQ9H082 229 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 ZMYND15Q9H091 742 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 SRMSQ9H3Y6 488 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 GPAMQ9HCL2 828 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 OR6C2Q9NZP2 312 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 LNPEPQ9UIQ6 1025 aa11.79□□□□□ -0.52
CHKA-203ENST00000525155 MTO1Q9Y2Z2 717 aaKnown RBP11.79□□□□□ -0.52
CHKA-203ENST00000525155 CCDC189A1A4V9 331 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 CLEC18AA5D8T8 446 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 PSIP1O75475 530 aaKnown RBP11.78□□□□□ -0.52
CHKA-203ENST00000525155 PIAS1O75925 651 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 C1orf105O95561 183 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 PDGFAP04085 211 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 F7P08709 466 aaPredicted RBP11.78□□□□□ -0.52
CHKA-203ENST00000525155 TCN2P20062 427 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 CYP2A7P20853 494 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 DLSTP36957 453 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 CASRP41180 1078 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 TAS2R39P59534 338 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 RAB10P61026 200 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 FOXK1P85037 733 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 TIAL1Q01085 375 aaKnown RBP eCLIP11.78□□□□□ -0.526e-7■□□□□ 9.5
CHKA-203ENST00000525155 IL11RAQ14626 422 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 PRAMEF17Q5VTA0 474 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 PWWP2BQ6NUJ5 590 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 IRGCQ6NXR0 463 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 DUS1LQ6P1R4 473 aaKnown RBP11.78□□□□□ -0.52
CHKA-203ENST00000525155 FAM199XQ6PEV8 388 aaPredicted RBP11.78□□□□□ -0.52
CHKA-203ENST00000525155 FBXO38Q6PIJ6 1188 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 CLEC18BQ6UXF7 455 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 AMIGO1Q86WK6 493 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 CPNE9Q8IYJ1 553 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 CARFQ8N187 725 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 SLC38A9Q8NBW4 561 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 CLEC18CQ8NCF0 446 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 OR5AR1Q8NGP9 310 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 GIMAP7Q8NHV1 300 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 MCOLN3Q8TDD5 553 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 AENQ8WTP8 325 aaKnown RBP11.78□□□□□ -0.52
CHKA-203ENST00000525155 EEF1AKMT1Q8WVE0 214 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 APOBEC4Q8WW27 367 aaKnown RBP11.78□□□□□ -0.52
CHKA-203ENST00000525155 SLC22A18Q96BI1 424 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 LINGO1Q96FE5 620 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 CD180Q99467 661 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 MAP3K3Q99759 626 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 OLFM1Q99784 485 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 HGH1Q9BTY7 390 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 SPATA7Q9P0W8 599 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 GALPQ9UBC7 116 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 TLK1Q9UKI8 766 aa11.78□□□□□ -0.52
CHKA-203ENST00000525155 TDRKHQ9Y2W6 561 aaKnown RBP11.78□□□□□ -0.52
CHKA-203ENST00000525155 USP9XQ93008 2570 aaPredicted RBP11.77□□□□□ -0.52
CHKA-203ENST00000525155 A0A087X1B8 175 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 IQANK1A0A1B0GTG1 560 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 POC1B-GALNT4F8VUJ3 575 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 GFYI3L273 518 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 SNRPAP09012 282 aaKnown RBP11.77□□□□□ -0.53
CHKA-203ENST00000525155 ENO2P09104 434 aaPredicted RBP11.77□□□□□ -0.53
CHKA-203ENST00000525155 HIST1H2AGP0C0S8 130 aaPredicted RBP11.77□□□□□ -0.53
CHKA-203ENST00000525155 ZNF37AP17032 561 aaPredicted RBP11.77□□□□□ -0.53
CHKA-203ENST00000525155 HIST1H2ADP20671 130 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 SERPINB8P50452 374 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 RAB28P51157 221 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 ATP6V0D1P61421 351 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 PRKG2Q13237 762 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 ERV3-1Q14264 604 aa11.77□□□□□ -0.53
CHKA-203ENST00000525155 ARHGAP19Q14CB8 494 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms