RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 TYK2P29597 1187 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 GRK3P35626 688 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 SLC26A3P40879 764 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 HNMTP50135 292 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 PMS2P54278 862 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 TBPL1P62380 186 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 MC1RQ01726 317 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 TLE3Q04726 772 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 ABHD18Q0P651 414 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 CLN3Q13286 438 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 GRB7Q14451 532 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 EFTUD2Q15029 972 aaKnown RBP eCLIP5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 FAM83EQ2M2I3 478 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 CCSMST1Q4G0I0 132 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 TCTE1Q5JU00 501 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 MROH9Q5TGP6 573 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 PRAMEF13Q5VWM6 474 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 ICE2Q659A1 982 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 PWWP2BQ6NUJ5 590 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 TLDC1Q6P9B6 456 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 FIGLAQ6QHK4 219 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 AGTRAPQ6RW13 159 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 SUSD1Q6UWL2 747 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 CYHR1Q6ZMK1 362 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 CCDC81Q6ZN84 652 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 CDHR3Q6ZTQ4 885 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 C17orf64Q86WR6 236 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 GPSM1Q86YR5 675 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 TCAIMQ8N3R3 496 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 ZNF655Q8N720 491 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 TTC29Q8NA56 475 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 GALNT6Q8NCL4 622 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 ZNF480Q8WV37 535 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 HNRNPLLQ8WVV9 542 aaKnown RBP5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 ZUFSPQ96AP4 578 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 FBXL8Q96CD0 374 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 ZNF501Q96CX3 271 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 PPM1MQ96MI6 270 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 PAFAH2Q99487 392 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 SELENOSQ9BQE4 189 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 MENTQ9BUN1 341 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 DERL2Q9GZP9 239 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 CHRNA10Q9GZZ6 450 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 CNOT10Q9H9A5 744 aaKnown RBP5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 ACTR5Q9H9F9 607 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 CAB39LQ9H9S4 337 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 NMRAL1Q9HBL8 299 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 APMAPQ9HDC9 416 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 PRM3Q9NNZ6 103 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 SMYD2Q9NRG4 433 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 STOX2Q9P2F5 926 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 KCND3Q9UK17 655 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 ADAMTS6Q9UKP5 1117 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 PADI1Q9ULC6 663 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 RNF112Q9ULX5 631 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 SNX7Q9UNH6 387 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 NOVA2Q9UNW9 492 aaKnown RBP5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 PDE10AQ9Y233 779 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 MTO1Q9Y2Z2 717 aaKnown RBP5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 ACOT9Q9Y305 439 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 DYRK1BQ9Y463 629 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 TMEM184BQ9Y519 407 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 OARD1Q9Y530 152 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 PCDHB3Q9Y5E6 796 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 PTPRBP23467 1997 aa5.2□□□□□ -1.58
HMGB1P40-201ENST00000525121 DNAH14Q0VDD8 3507 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 DCHS1Q96JQ0 3298 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 WDR87Q6ZQQ6 2873 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 GOLGA4Q13439 2230 aaKnown RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 ZFC3H1O60293 1989 aaKnown RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 IQANK1A0A1B0GTG1 560 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 CCDC189A1A4V9 331 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 KRT87PA6NCN2 255 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 SYCE1LA8MT33 242 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 ZNF891A8MT65 544 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 SUPT3HB4E1H0 165 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 C21orf140B9A014 251 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 E7ENX8 843 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 TAF4O00268 1085 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 CDC7O00311 574 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 TXNDC9O14530 226 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 PRPF4O43172 522 aaKnown RBP eCLIP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 RIPK2O43353 540 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 ZNF749O43361 778 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 SRPX2O60687 465 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 SUPT3HO75486 399 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 FAM155BO75949 473 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 IPO13O94829 963 aaKnown RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 TSPAN12O95859 305 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 DLGAP3O95886 979 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 CAPNS1P04632 268 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 TUBBP07437 444 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 CD63P08962 238 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 LTA4HP09960 611 aaKnown RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 TPBGLP0DKB5 382 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 ATXN8OSP0DMR3 200 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 PIM1P11309 404 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 PSMB5P28074 263 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 IMPA1P29218 277 aa5.19□□□□□ -1.58
HMGB1P40-201ENST00000525121 ECHS1P30084 290 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms