RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 CCNT2O60583 730 aaKnown RBP23.33■■□□□ 1.32
PVT1-212ENST00000521951 WDR47O94967 919 aa23.33■■□□□ 1.32
PVT1-212ENST00000521951 CCND1P24385 295 aa23.33■■□□□ 1.32
PVT1-212ENST00000521951 PSMB5P28074 263 aa23.33■■□□□ 1.32
PVT1-212ENST00000521951 EEF1DP29692 281 aaKnown RBP23.33■■□□□ 1.32
PVT1-212ENST00000521951 ALDH3A1P30838 453 aa23.33■■□□□ 1.32
PVT1-212ENST00000521951 SERPINB4P48594 390 aa23.33■■□□□ 1.32
PVT1-212ENST00000521951 THEMIS2Q5TEJ8 643 aa23.33■■□□□ 1.32
PVT1-212ENST00000521951 HHATQ5VTY9 493 aa23.33■■□□□ 1.32
PVT1-212ENST00000521951 RAB44Q7Z6P3 723 aaPredicted RBP23.33■■□□□ 1.32
PVT1-212ENST00000521951 THOC6Q86W42 341 aaKnown RBP23.33■■□□□ 1.32
PVT1-212ENST00000521951 OR2A1Q8NGT9 310 aa23.33■■□□□ 1.32
PVT1-212ENST00000521951 MDM1Q8TC05 714 aa23.33■■□□□ 1.32
PVT1-212ENST00000521951 MGARPQ8TDB4 240 aa23.33■■□□□ 1.32
PVT1-212ENST00000521951 SLC22A18Q96BI1 424 aa23.33■■□□□ 1.32
PVT1-212ENST00000521951 OR4K3Q96R72 315 aa23.33■■□□□ 1.32
PVT1-212ENST00000521951 MECRQ9BV79 373 aa23.33■■□□□ 1.32
PVT1-212ENST00000521951 ACAT2Q9BWD1 397 aa23.33■■□□□ 1.32
PVT1-212ENST00000521951 RAB33BQ9H082 229 aa23.33■■□□□ 1.32
PVT1-212ENST00000521951 ABCG4Q9H172 646 aa23.33■■□□□ 1.32
PVT1-212ENST00000521951 TOR4AQ9NXH8 423 aa23.33■■□□□ 1.32
PVT1-212ENST00000521951 ATXN7L1Q9ULK2 861 aaPredicted RBP23.33■■□□□ 1.32
PVT1-212ENST00000521951 PCDHB11Q9Y5F2 797 aa23.33■■□□□ 1.32
PVT1-212ENST00000521951 MATN2O00339 956 aa23.32■■□□□ 1.32
PVT1-212ENST00000521951 BPGMP07738 259 aa23.32■■□□□ 1.32
PVT1-212ENST00000521951 UGT2B7P16662 529 aa23.32■■□□□ 1.32
PVT1-212ENST00000521951 NPPBP16860 134 aa23.32■■□□□ 1.32
PVT1-212ENST00000521951 NR1D1P20393 614 aa23.32■■□□□ 1.32
PVT1-212ENST00000521951 IMPDH1P20839 514 aa23.32■■□□□ 1.32
PVT1-212ENST00000521951 PRDX3P30048 256 aaKnown RBP23.32■■□□□ 1.32
PVT1-212ENST00000521951 CSF2RBP32927 897 aa23.32■■□□□ 1.32
PVT1-212ENST00000521951 ILKQ13418 452 aa23.32■■□□□ 1.32
PVT1-212ENST00000521951 IRGCQ6NXR0 463 aa23.32■■□□□ 1.32
PVT1-212ENST00000521951 TAC3Q9UHF0 121 aa23.32■■□□□ 1.32
PVT1-212ENST00000521951 CDV3Q9UKY7 258 aaKnown RBP23.32■■□□□ 1.32
PVT1-212ENST00000521951 K7EPI3 171 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 NTN3O00634 580 aaPredicted RBP23.31■■□□□ 1.32
PVT1-212ENST00000521951 CAPN5O15484 640 aaPredicted RBP23.31■■□□□ 1.32
PVT1-212ENST00000521951 RFPL3O75679 317 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 GFERP55789 205 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 DNAJB13P59910 316 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 HERVK_113P63132 956 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 SF1Q15637 639 aaKnown RBP23.31■■□□□ 1.32
PVT1-212ENST00000521951 CCDC157Q569K6 752 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 ZNF678Q5SXM1 525 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 PRAMEF13Q5VWM6 474 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 WDR74Q6RFH5 385 aaPredicted RBP23.31■■□□□ 1.32
PVT1-212ENST00000521951 LCTLQ6UWM7 567 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 LRRC70Q7Z2Q7 622 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 L3HYPDHQ96EM0 354 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 TMEM237Q96Q45 408 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 MIPEPQ99797 713 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 PAIP2Q9BPZ3 127 aaKnown RBP23.31■■□□□ 1.32
PVT1-212ENST00000521951 NUDT22Q9BRQ3 303 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 C1QTNF3Q9BXJ4 246 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 ERVK-6Q9BXR3 956 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 PCBD2Q9H0N5 130 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 SYNDIG1Q9H7V2 258 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 DNAJC11Q9NVH1 559 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 OPTCQ9UBM4 332 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 POMT2Q9UKY4 750 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 PCDHGA1Q9Y5H4 931 aa23.31■■□□□ 1.32
PVT1-212ENST00000521951 TRIM13O60858 407 aa23.3■■□□□ 1.32
PVT1-212ENST00000521951 CPNE6O95741 557 aa23.3■■□□□ 1.32
PVT1-212ENST00000521951 YBX1P67809 324 aaKnown RBP23.3■■□□□ 1.32
PVT1-212ENST00000521951 UNC50Q53HI1 259 aa23.3■■□□□ 1.32
PVT1-212ENST00000521951 LIPMQ5VYY2 423 aa23.3■■□□□ 1.32
PVT1-212ENST00000521951 METTL2BQ6P1Q9 378 aaKnown RBP23.3■■□□□ 1.32
PVT1-212ENST00000521951 SPESP1Q6UW49 350 aa23.3■■□□□ 1.32
PVT1-212ENST00000521951 TMPRSS9Q7Z410 1059 aa23.3■■□□□ 1.32
PVT1-212ENST00000521951 PLXDC1Q8IUK5 500 aa23.3■■□□□ 1.32
PVT1-212ENST00000521951 FAM20CQ8IXL6 584 aa23.3■■□□□ 1.32
PVT1-212ENST00000521951 FAM122AQ96E09 287 aa23.3■■□□□ 1.32
PVT1-212ENST00000521951 MOCOSQ96EN8 888 aa23.3■■□□□ 1.32
PVT1-212ENST00000521951 ZDHHC12Q96GR4 267 aa23.3■■□□□ 1.32
PVT1-212ENST00000521951 TGM7Q96PF1 710 aa23.3■■□□□ 1.32
PVT1-212ENST00000521951 GFM1Q96RP9 751 aaKnown RBP23.3■■□□□ 1.32
PVT1-212ENST00000521951 ZMYND15Q9H091 742 aa23.3■■□□□ 1.32
PVT1-212ENST00000521951 ACSS2Q9NR19 701 aa23.3■■□□□ 1.32
PVT1-212ENST00000521951 TMEM9Q9P0T7 183 aa23.3■■□□□ 1.32
PVT1-212ENST00000521951 PCTPQ9UKL6 214 aa23.3■■□□□ 1.32
PVT1-212ENST00000521951 WDR91A4D1P6 747 aa23.29■■□□□ 1.32
PVT1-212ENST00000521951 E2F3O00716 465 aa23.29■■□□□ 1.32
PVT1-212ENST00000521951 BIRC5O15392 142 aa23.29■■□□□ 1.32
PVT1-212ENST00000521951 RPS17P08708 135 aaKnown RBP23.29■■□□□ 1.32
PVT1-212ENST00000521951 HOXB3P14651 431 aaPredicted RBP23.29■■□□□ 1.32
PVT1-212ENST00000521951 E2F1Q01094 437 aa23.29■■□□□ 1.32
PVT1-212ENST00000521951 PRDX1Q06830 199 aaKnown RBP23.29■■□□□ 1.32
PVT1-212ENST00000521951 SLC5A12Q1EHB4 618 aa23.29■■□□□ 1.32
PVT1-212ENST00000521951 RSPO4Q2I0M5 234 aaPredicted RBP23.29■■□□□ 1.32
PVT1-212ENST00000521951 ICE2Q659A1 982 aa23.29■■□□□ 1.32
PVT1-212ENST00000521951 TMEM71Q6P5X7 295 aa23.29■■□□□ 1.32
PVT1-212ENST00000521951 RPS27LQ71UM5 84 aaKnown RBP23.29■■□□□ 1.32
PVT1-212ENST00000521951 SLCO6A1Q86UG4 719 aa23.29■■□□□ 1.32
PVT1-212ENST00000521951 NUDCD3Q8IVD9 361 aa23.29■■□□□ 1.32
PVT1-212ENST00000521951 TEX9Q8N6V9 391 aa23.29■■□□□ 1.32
PVT1-212ENST00000521951 PPM1MQ96MI6 270 aa23.29■■□□□ 1.32
PVT1-212ENST00000521951 HAUS8Q9BT25 410 aa23.29■■□□□ 1.32
PVT1-212ENST00000521951 PITPNM3Q9BZ71 974 aa23.29■■□□□ 1.32
PVT1-212ENST00000521951 SH2B3Q9UQQ2 575 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms