RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 KRTCAP2Q8N6L1 136 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 OR2T34Q8NGX1 318 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 APIPQ96GX9 242 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 NECTIN4Q96NY8 510 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 TEX101Q9BY14 249 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 ZDHHC5Q9C0B5 715 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 MKRN2Q9H000 416 aaKnown RBP17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 MBNL1Q9NR56 388 aaKnown RBP17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 ZFR2Q9UPR6 939 aaKnown RBP17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 COLQQ9Y215 455 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 AP4S1Q9Y587 144 aa17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 ZFC3H1O60293 1989 aaKnown RBP17.91■□□□□ 0.46
TRAPPC9-210ENST00000521667 AMD1P17707 334 aa17.9■□□□□ 0.46
TRAPPC9-210ENST00000521667 TEAD1P28347 426 aa17.9■□□□□ 0.46
TRAPPC9-210ENST00000521667 CTHP32929 405 aa17.9■□□□□ 0.46
TRAPPC9-210ENST00000521667 CLDN8P56748 225 aa17.9■□□□□ 0.46
TRAPPC9-210ENST00000521667 SPANXN4Q5MJ08 99 aa17.9■□□□□ 0.46
TRAPPC9-210ENST00000521667 PDSS2Q86YH6 399 aa17.9■□□□□ 0.46
TRAPPC9-210ENST00000521667 LILRA2Q8N149 483 aa17.9■□□□□ 0.46
TRAPPC9-210ENST00000521667 CLHC1Q8NHS4 586 aa17.9■□□□□ 0.46
TRAPPC9-210ENST00000521667 GANCQ8TET4 914 aa17.9■□□□□ 0.46
TRAPPC9-210ENST00000521667 TMEM74Q96NL1 305 aa17.9■□□□□ 0.46
TRAPPC9-210ENST00000521667 PKP2Q99959 881 aa17.9■□□□□ 0.46
TRAPPC9-210ENST00000521667 MUC13Q9H3R2 512 aa17.9■□□□□ 0.46
TRAPPC9-210ENST00000521667 ITM2CQ9NQX7 267 aa17.9■□□□□ 0.46
TRAPPC9-210ENST00000521667 FBXL12Q9NXK8 326 aa17.9■□□□□ 0.46
TRAPPC9-210ENST00000521667 ACTR3BQ9P1U1 418 aa17.9■□□□□ 0.46
TRAPPC9-210ENST00000521667 EGFL7Q9UHF1 273 aa17.9■□□□□ 0.46
TRAPPC9-210ENST00000521667 BRWD1Q9NSI6 2320 aa17.9■□□□□ 0.46
TRAPPC9-210ENST00000521667 KCNH1O95259 989 aa17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 PGRP06401 933 aa17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 SLC7A1P30825 629 aa17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 GRIA3P42263 894 aa17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 E2F2Q14209 437 aa17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 INPP5AQ14642 412 aa17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 IRF4Q15306 451 aa17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 LCN8Q6JVE9 175 aa17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 PDZD3Q86UT5 571 aa17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 RNF175Q8N4F7 328 aa17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 OXR1Q8N573 874 aa17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 SPDYE1Q8NFV5 336 aaPredicted RBP17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 NEIL2Q969S2 332 aa17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 APOLD1Q96LR9 279 aa17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 PPM1MQ96MI6 270 aa17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 CGREF1Q99674 301 aa17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 KCTD14Q9BQ13 255 aaPredicted RBP17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 WDR26Q9H7D7 661 aa17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 SGK2Q9HBY8 427 aa17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 SLC23A2Q9UGH3 650 aa17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 DNMT3AQ9Y6K1 912 aaPredicted RBP17.89■□□□□ 0.46
TRAPPC9-210ENST00000521667 CKAP5Q14008 2032 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 AQP12BA6NM10 295 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 H3BQ06 376 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 SOX1O00570 391 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 PAK4O96013 591 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 DNTTP04053 509 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 SDC1P18827 310 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 CLNS1AP54105 237 aaKnown RBP17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 RPS21P63220 83 aaKnown RBP17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 FGL2Q14314 439 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 MAPKAPK3Q16644 382 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 GRAMD1BQ3KR37 738 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 SFT2D3Q587I9 215 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 SLCO4C1Q6ZQN7 724 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 IFNEQ86WN2 208 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 AQP12AQ8IXF9 295 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 IL17RCQ8NAC3 791 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 TP53I13Q8NBR0 393 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 SMRP1Q8NCR6 262 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 FAM131CQ96AQ9 280 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 SLCO4A1Q96BD0 722 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 FCRL1Q96LA6 429 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 SGPP1Q9BX95 441 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 FBRSQ9HAH7 460 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 SPATA6Q9NWH7 488 aaPredicted RBP17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 VPS29Q9UBQ0 182 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 ASF1AQ9Y294 204 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 PCDHGA11Q9Y5H2 935 aa17.89■□□□□ 0.45
TRAPPC9-210ENST00000521667 GPR89AB7ZAQ6 455 aa17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 ARPC2O15144 300 aa17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 PLRG1O43660 514 aaKnown RBP17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 EGFP01133 1207 aa17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 GPR89BP0CG08 455 aa17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 HSD3B1P14060 373 aa17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 HSD3B2P26439 372 aa17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 TRIM23P36406 574 aa17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 IRAK1BP1Q5VVH5 260 aa17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 NOXRED1Q6NXP6 359 aa17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 PTRH1Q86Y79 214 aaKnown RBP17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 LRRC56Q8IYG6 542 aaPredicted RBP17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 PLCD3Q8N3E9 789 aa17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 GTF2H4Q92759 462 aa17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 TSSK3Q96PN8 268 aa17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 MTERF1Q99551 399 aaKnown RBP17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 C1QTNF2Q9BXJ5 285 aa17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 DYRK1BQ9Y463 629 aa17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 OR1A2Q9Y585 309 aa17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 ZNF839A8K0R7 811 aa17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 ADAM23O75077 832 aa17.88■□□□□ 0.45
TRAPPC9-210ENST00000521667 NPPBP16860 134 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms