RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 DNASE1L3Q13609 305 aa19.85■□□□□ 0.77
TRIM35-203ENST00000521253 TAF1BQ53T94 588 aaPredicted RBP19.85■□□□□ 0.77
TRIM35-203ENST00000521253 SUSD1Q6UWL2 747 aa19.85■□□□□ 0.77
TRIM35-203ENST00000521253 CCDC25Q86WR0 208 aa19.85■□□□□ 0.77
TRIM35-203ENST00000521253 MR1Q95460 341 aa19.85■□□□□ 0.77
TRIM35-203ENST00000521253 CLIP3Q96DZ5 547 aa19.85■□□□□ 0.77
TRIM35-203ENST00000521253 ACAT2Q9BWD1 397 aa19.85■□□□□ 0.77
TRIM35-203ENST00000521253 PCMTD2Q9NV79 361 aa19.85■□□□□ 0.77
TRIM35-203ENST00000521253 NSMCE4AQ9NXX6 385 aa19.85■□□□□ 0.77
TRIM35-203ENST00000521253 KCND3Q9UK17 655 aa19.85■□□□□ 0.77
TRIM35-203ENST00000521253 ADAMTS6Q9UKP5 1117 aa19.85■□□□□ 0.77
TRIM35-203ENST00000521253 TCRBV9S1A1TA0A576 114 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 C21orf140B9A014 251 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 MEN1O00255 615 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 KATNA1O75449 491 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 TSPAN12O95859 305 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 ITGB2P05107 769 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 KLK3P07288 261 aaPredicted RBP19.84■□□□□ 0.77
TRIM35-203ENST00000521253 PRKAR1AP10644 381 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 GPX6P59796 221 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 ZNF517Q6ZMY9 492 aaPredicted RBP19.84■□□□□ 0.77
TRIM35-203ENST00000521253 MCATQ8IVS2 390 aaKnown RBP19.84■□□□□ 0.77
TRIM35-203ENST00000521253 DSELQ8IZU8 1212 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 MYO1HQ8N1T3 1032 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 MMGT1Q8N4V1 131 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 NOA1Q8NC60 698 aaKnown RBP19.84■□□□□ 0.77
TRIM35-203ENST00000521253 PPFIBP2Q8ND30 876 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 SEC14L1Q92503 715 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 EXTL1Q92935 676 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 ZUFSPQ96AP4 578 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 RUFY1Q96T51 708 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 SLC7A5P2Q9GIP4 190 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 EURLQ9NYK6 297 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 PCDHGA6Q9Y5G7 932 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 KLK4Q9Y5K2 254 aa19.84■□□□□ 0.77
TRIM35-203ENST00000521253 SNRNP200O75643 2136 aaKnown RBP19.84■□□□□ 0.77
TRIM35-203ENST00000521253 ZNF839A8K0R7 811 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 CXorf49A8MYA2 514 aaPredicted RBP19.83■□□□□ 0.77
TRIM35-203ENST00000521253 TARM1B6A8C7 271 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 E7ENX8 843 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 ZSCAN9O15535 394 aaPredicted RBP19.83■□□□□ 0.77
TRIM35-203ENST00000521253 C8GP07360 202 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 RPA3P35244 121 aaPredicted RBP19.83■□□□□ 0.77
TRIM35-203ENST00000521253 MAGEA4P43358 317 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 IL2P60568 153 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 GUCY2DQ02846 1103 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 TAP2Q03519 686 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 CDC20Q12834 499 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 SP140Q13342 867 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 TSTA3Q13630 321 aaPredicted RBP19.83■□□□□ 0.77
TRIM35-203ENST00000521253 TBR1Q16650 682 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 LCN10Q6JVE6 187 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 C3orf62Q6ZUJ4 267 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 SYTL1Q8IYJ3 562 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 LSM14AQ8ND56 463 aaKnown RBP19.83■□□□□ 0.77
TRIM35-203ENST00000521253 MNS1Q8NEH6 495 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 SLC39A7Q92504 469 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 WBP1Q96G27 269 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 MCMBPQ9BTE3 642 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 CHST8Q9H2A9 424 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 IRAK4Q9NWZ3 460 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 PDE10AQ9Y233 779 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 AP1M2Q9Y6Q5 423 aa19.83■□□□□ 0.77
TRIM35-203ENST00000521253 FAM95CA0A1B0GW59 222 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 SLC16A5O15375 505 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 NRP2O60462 931 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 CTSVO60911 334 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 HBQ1P09105 142 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 SAT1P21673 171 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 IMPA1P29218 277 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 CMPK1P30085 196 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 MC1RQ01726 317 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 COL9A2Q14055 689 aaPredicted RBP19.82■□□□□ 0.76
TRIM35-203ENST00000521253 PTCHD3Q3KNS1 767 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 LINC00303Q3SY05 128 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 ZC3H12BQ5HYM0 836 aaKnown RBP19.82■□□□□ 0.76
TRIM35-203ENST00000521253 ATP1A1-AS1Q5TC04 95 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 TLDC1Q6P9B6 456 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 CYS1Q717R9 158 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 LRRC56Q8IYG6 542 aaPredicted RBP19.82■□□□□ 0.76
TRIM35-203ENST00000521253 ZNF655Q8N720 491 aaPredicted RBP19.82■□□□□ 0.76
TRIM35-203ENST00000521253 KIF18AQ8NI77 898 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 MCOLN3Q8TDD5 553 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 CDKL2Q92772 493 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 RHOJQ9H4E5 214 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 PARVBQ9HBI1 364 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 SLC6A20Q9NP91 592 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 ZDHHC18Q9NUE0 388 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 TAC3Q9UHF0 121 aa19.82■□□□□ 0.76
TRIM35-203ENST00000521253 CTAGE15A4D2H0 777 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 FAM159BA6NKW6 160 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 C1QAP02745 245 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 GSTA2P09210 222 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 CTAGE8P0CG41 777 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 TAS2R39P59534 338 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 PHKG1Q16816 387 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 CRTC2Q53ET0 693 aaPredicted RBP19.81■□□□□ 0.76
TRIM35-203ENST00000521253 ZNF385CQ66K41 422 aaPredicted RBP19.81■□□□□ 0.76
TRIM35-203ENST00000521253 RHBDD2Q6NTF9 364 aa19.81■□□□□ 0.76
TRIM35-203ENST00000521253 C16orf46Q6P387 395 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms