RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 ZADH2Q8N4Q0 377 aa18.81■□□□□ 0.6
PABPC1-215ENST00000520804 CISD2Q8N5K1 135 aaKnown RBP18.81■□□□□ 0.6
PABPC1-215ENST00000520804 OTUD6BQ8N6M0 293 aa18.81■□□□□ 0.6
PABPC1-215ENST00000520804 INPP5DQ92835 1189 aa18.81■□□□□ 0.6
PABPC1-215ENST00000520804 MFSD3Q96ES6 412 aa18.81■□□□□ 0.6
PABPC1-215ENST00000520804 FOPNLQ96NB1 174 aa18.81■□□□□ 0.6
PABPC1-215ENST00000520804 BIRC8Q96P09 236 aa18.81■□□□□ 0.6
PABPC1-215ENST00000520804 MIPEPQ99797 713 aa18.81■□□□□ 0.6
PABPC1-215ENST00000520804 ILKAPQ9H0C8 392 aaPredicted RBP18.81■□□□□ 0.6
PABPC1-215ENST00000520804 SLC6A20Q9NP91 592 aa18.81■□□□□ 0.6
PABPC1-215ENST00000520804 ASF1BQ9NVP2 202 aa18.81■□□□□ 0.6
PABPC1-215ENST00000520804 SYBUQ9NX95 663 aa18.81■□□□□ 0.6
PABPC1-215ENST00000520804 IL1RAPL1Q9NZN1 696 aa18.81■□□□□ 0.6
PABPC1-215ENST00000520804 RP1L1Q8IWN7 2480 aaPredicted RBP18.8■□□□□ 0.6
PABPC1-215ENST00000520804 SOCS6O14544 535 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 VAPBO95292 243 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 FGGP02679 453 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 ITGA3P26006 1051 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 OR1D4P47884 311 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 KCNJ1P48048 391 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 VSX2P58304 361 aaPredicted RBP18.8■□□□□ 0.6
PABPC1-215ENST00000520804 CDK16Q00536 496 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 NR6A1Q15406 480 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 TYSND1Q2T9J0 566 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 CRB2Q5IJ48 1285 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 WASHC2DQ5SRD0 308 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 MRNIPQ6NTE8 343 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 CNSTQ6PJW8 725 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 CES3Q6UWW8 571 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 SDCCAG8Q86SQ7 713 aaPredicted RBP18.8■□□□□ 0.6
PABPC1-215ENST00000520804 OR2L3Q8NG85 312 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 OR2A1Q8NGT9 310 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 PRR7Q8TB68 274 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 MAGEC3Q8TD91 643 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 MAIP1Q8WWC4 291 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 LPGAT1Q92604 370 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 SPATA7Q9P0W8 599 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 CTSFQ9UBX1 484 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 NXT1Q9UKK6 140 aaKnown RBP18.8■□□□□ 0.6
PABPC1-215ENST00000520804 HS3ST3B1Q9Y662 390 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 FAM169AQ9Y6X4 670 aa18.8■□□□□ 0.6
PABPC1-215ENST00000520804 UTP20O75691 2785 aaKnown RBP18.79■□□□□ 0.6
PABPC1-215ENST00000520804 ICE1Q9Y2F5 2266 aa18.79■□□□□ 0.6
PABPC1-215ENST00000520804 A0A1W2PPV9 198 aa18.79■□□□□ 0.6
PABPC1-215ENST00000520804 NIPSNAP2O75323 286 aa18.79■□□□□ 0.6
PABPC1-215ENST00000520804 CBX6O95503 412 aa18.79■□□□□ 0.6
PABPC1-215ENST00000520804 TPSB2P20231 275 aa18.79■□□□□ 0.6
PABPC1-215ENST00000520804 FMO4P31512 558 aa18.79■□□□□ 0.6
PABPC1-215ENST00000520804 GBX1Q14549 363 aa18.79■□□□□ 0.6
PABPC1-215ENST00000520804 TPSAB1Q15661 275 aa18.79■□□□□ 0.6
PABPC1-215ENST00000520804 RNF187Q5TA31 235 aaPredicted RBP18.79■□□□□ 0.6
PABPC1-215ENST00000520804 PRAMEF13Q5VWM6 474 aa18.79■□□□□ 0.6
PABPC1-215ENST00000520804 HIST2H2BCQ6DN03 193 aa18.79■□□□□ 0.6
PABPC1-215ENST00000520804 FRMPD2BQ6IN97 320 aa18.79■□□□□ 0.6
PABPC1-215ENST00000520804 KIRREL2Q6UWL6 708 aa18.79■□□□□ 0.6
PABPC1-215ENST00000520804 ZNF662Q6ZS27 426 aa18.79■□□□□ 0.6
PABPC1-215ENST00000520804 SHISA6Q6ZSJ9 500 aa18.79■□□□□ 0.6
PABPC1-215ENST00000520804 METTL27Q8N6F8 245 aaPredicted RBP18.79■□□□□ 0.6
PABPC1-215ENST00000520804 SOX17Q9H6I2 414 aaPredicted RBP18.79■□□□□ 0.6
PABPC1-215ENST00000520804 SOX13Q9UN79 622 aa18.79■□□□□ 0.6
PABPC1-215ENST00000520804 SPTAN1Q13813 2472 aaKnown RBP18.79■□□□□ 0.6
PABPC1-215ENST00000520804 TCRBV7S3A2A0A539 114 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 HYKKA2RU49 373 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 VSTM2BA6NLU5 285 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 GOLGA8KD6RF30 607 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 H3BMM5 538 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 GOLGA8TH3BQL2 631 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 NRP2O60462 931 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 ALOX12BO75342 701 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 MED26O95402 600 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 MATN4O95460 622 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 DDAH2O95865 285 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 ESR1P03372 595 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 ATP5DP30049 168 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 ADARP55265 1226 aaKnown RBP18.78■□□□□ 0.6
PABPC1-215ENST00000520804 FASTKQ14296 549 aaKnown RBP18.78■□□□□ 0.6
PABPC1-215ENST00000520804 RNF44Q7L0R7 432 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 CUZD1Q86UP6 607 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 DTWD1Q8N5C7 304 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 TCF12Q99081 682 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 LZTFL1Q9NQ48 299 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 SEMA3GQ9NS98 782 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 PCDHGA10Q9Y5H3 936 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 COPG1Q9Y678 874 aaKnown RBP18.78■□□□□ 0.6
PABPC1-215ENST00000520804 MAU2Q9Y6X3 613 aa18.78■□□□□ 0.6
PABPC1-215ENST00000520804 LOC105369274A0A096LPK9 316 aa18.77■□□□□ 0.6
PABPC1-215ENST00000520804 LOC102723532A0A0G2JNH3 316 aa18.77■□□□□ 0.6
PABPC1-215ENST00000520804 A0A0J9YVX5 310 aa18.77■□□□□ 0.6
PABPC1-215ENST00000520804 PFDN6O15212 129 aa18.77■□□□□ 0.6
PABPC1-215ENST00000520804 ERGP11308 486 aa18.77■□□□□ 0.6
PABPC1-215ENST00000520804 GLRBP48167 497 aa18.77■□□□□ 0.6
PABPC1-215ENST00000520804 YBX1P67809 324 aaKnown RBP18.77■□□□□ 0.6
PABPC1-215ENST00000520804 RBBP7Q16576 425 aa18.77■□□□□ 0.6
PABPC1-215ENST00000520804 KCTD19Q17RG1 926 aaPredicted RBP18.77■□□□□ 0.6
PABPC1-215ENST00000520804 KIAA0930Q6ICG6 404 aaPredicted RBP18.77■□□□□ 0.6
PABPC1-215ENST00000520804 PRMT9Q6P2P2 845 aa18.77■□□□□ 0.6
PABPC1-215ENST00000520804 IGFL2Q6UWQ7 119 aa18.77■□□□□ 0.6
PABPC1-215ENST00000520804 OR4N4Q8N0Y3 316 aa18.77■□□□□ 0.6
PABPC1-215ENST00000520804 BARD1Q99728 777 aaKnown RBP18.77■□□□□ 0.6
PABPC1-215ENST00000520804 WDR77Q9BQA1 342 aaPredicted RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms