RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 PHKG1Q16816 387 aa11.09□□□□□ -0.63
SPIDR-212ENST00000519661 YOD1Q5VVQ6 348 aaPredicted RBP11.09□□□□□ -0.63
SPIDR-212ENST00000519661 FCRL6Q6DN72 434 aa11.09□□□□□ -0.63
SPIDR-212ENST00000519661 INO80CQ6PI98 192 aaPredicted RBP11.09□□□□□ -0.63
SPIDR-212ENST00000519661 LRRC69Q6ZNQ3 347 aa11.09□□□□□ -0.63
SPIDR-212ENST00000519661 UBE2R2Q712K3 238 aaPredicted RBP11.09□□□□□ -0.63
SPIDR-212ENST00000519661 TRMT10CQ7L0Y3 403 aaKnown RBP11.09□□□□□ -0.63
SPIDR-212ENST00000519661 ADAMTSL2Q86TH1 951 aa11.09□□□□□ -0.63
SPIDR-212ENST00000519661 ZFAND4Q86XD8 727 aa11.09□□□□□ -0.63
SPIDR-212ENST00000519661 NLGN4XQ8N0W4 816 aa11.09□□□□□ -0.63
SPIDR-212ENST00000519661 GPATCH11Q8N954 259 aa11.09□□□□□ -0.63
SPIDR-212ENST00000519661 NLGN4YQ8NFZ3 816 aaPredicted RBP11.09□□□□□ -0.63
SPIDR-212ENST00000519661 OR56A3Q8NH54 315 aa11.09□□□□□ -0.63
SPIDR-212ENST00000519661 CFAP61Q8NHU2 1237 aa11.09□□□□□ -0.63
SPIDR-212ENST00000519661 SKA2Q8WVK7 121 aaPredicted RBP11.09□□□□□ -0.63
SPIDR-212ENST00000519661 SLC44A1Q8WWI5 657 aa11.09□□□□□ -0.63
SPIDR-212ENST00000519661 FBXL8Q96CD0 374 aa11.09□□□□□ -0.63
SPIDR-212ENST00000519661 LINGO1Q96FE5 620 aa11.09□□□□□ -0.63
SPIDR-212ENST00000519661 CCNL2Q96S94 520 aaPredicted RBP11.09□□□□□ -0.63
SPIDR-212ENST00000519661 STOX2Q9P2F5 926 aaPredicted RBP11.09□□□□□ -0.63
SPIDR-212ENST00000519661 MTO1Q9Y2Z2 717 aaKnown RBP11.09□□□□□ -0.63
SPIDR-212ENST00000519661 AP1M2Q9Y6Q5 423 aa11.09□□□□□ -0.63
SPIDR-212ENST00000519661 IGSF10Q6WRI0 2623 aa11.09□□□□□ -0.63
SPIDR-212ENST00000519661 KCNE1BA0A087WTH5 132 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 ESPNB1AK53 854 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 C21orf140B9A014 251 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 MAP3K7O43318 606 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 RAD1O60671 282 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 CPNE3O75131 537 aaKnown RBP11.08□□□□□ -0.64
SPIDR-212ENST00000519661 CCNDBP1O95273 360 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 TIAF1O95411 115 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 SLC35E2BP0CK96 405 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 PVRP15151 417 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 STMN1P16949 149 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 ZNF28P17035 718 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 MAGP20916 626 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 CRABP2P29373 138 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 GGT5P36269 586 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 HNMTP50135 292 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 ATP1A2P50993 1020 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 TMPRSS3P57727 454 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 RAB10P61026 200 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 ATP6V0D1P61421 351 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 PCDH1Q08174 1060 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 E2F2Q14209 437 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 FASTKQ14296 549 aaKnown RBP11.08□□□□□ -0.64
SPIDR-212ENST00000519661 KCNAB1Q14722 419 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 RASA2Q15283 850 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 ZC3H12BQ5HYM0 836 aaKnown RBP11.08□□□□□ -0.64
SPIDR-212ENST00000519661 ICE2Q659A1 982 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 RHBDD2Q6NTF9 364 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 TLDC1Q6P9B6 456 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 FOXR1Q6PIV2 292 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 CCDC25Q86WR0 208 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 ARHGEF39Q8N4T4 335 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 LRRN4CLQ8ND94 238 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 ABHD11Q8NFV4 315 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 OR1L3Q8NH93 324 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 ANKRD49Q8WVL7 239 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 ATL1Q8WXF7 558 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 SLC45A3Q96JT2 553 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 PLCD4Q9BRC7 762 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 EFHD1Q9BUP0 239 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 EPB41L4BQ9H329 900 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 FANCEQ9HB96 536 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 GPAMQ9HCL2 828 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 TXNDC16Q9P2K2 825 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 PLCL2Q9UPR0 1127 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 NBEAQ8NFP9 2946 aa11.08□□□□□ -0.64
SPIDR-212ENST00000519661 KRT87PA6NCN2 255 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 ISM1B1AKI9 464 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 HCRTR1O43613 425 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 CTSVO60911 334 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 PIAS1O75925 651 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 HBQ1P09105 142 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 EZRP15311 586 aaKnown RBP11.07□□□□□ -0.64
SPIDR-212ENST00000519661 CNTFP26441 200 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 ITPKBP27987 946 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 ARL4DP49703 201 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 ITGA1P56199 1179 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 FOXM1Q08050 763 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 VAC14Q08AM6 782 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 SF1Q15637 639 aaKnown RBP11.07□□□□□ -0.64
SPIDR-212ENST00000519661 GPR19Q15760 415 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 TCTE1Q5JU00 501 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 FBXO38Q6PIJ6 1188 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 FIGLAQ6QHK4 219 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 AGTRAPQ6RW13 159 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 LCTLQ6UWM7 567 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 C6orf15Q6UXA7 325 aaPredicted RBP11.07□□□□□ -0.64
SPIDR-212ENST00000519661 TRIM73Q86UV7 250 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 PAQR7Q86WK9 346 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 CACNA2D3Q8IZS8 1091 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 PPM1NQ8N819 430 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 SLC38A9Q8NBW4 561 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 LSM14AQ8ND56 463 aaKnown RBP11.07□□□□□ -0.64
SPIDR-212ENST00000519661 OR4K1Q8NGD4 311 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 PROKR1Q8TCW9 393 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 WBP1Q96G27 269 aa11.07□□□□□ -0.64
SPIDR-212ENST00000519661 ELMO2Q96JJ3 720 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms