RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 LOC102723996A0A087X1L8 192 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 TMEM89A2RUT3 159 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 GRID2IPA4D2P6 1211 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 PINLYPA6NC86 204 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 SOCS5O75159 536 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 BMP15O95972 392 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 PEX11BO96011 259 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 PYGLP06737 847 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 TBXAS1P24557 533 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 CYLC1P35663 651 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 PSMC2P35998 433 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 ACVR1BP36896 505 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 SPINT3P49223 89 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 RAB28P51157 221 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 TAP2Q03519 686 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 HYAL2Q12891 473 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 NFE2L1Q14494 772 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 NFIL3Q16649 462 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 C15orf59Q2T9L4 293 aaPredicted RBP6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 TMEM249Q2WGJ8 235 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 C2CD6Q53TS8 623 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 RIPPLY2Q5TAB7 128 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 FAM173BQ6P4H8 233 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 KDELC1Q6UW63 502 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 SULF2Q8IWU5 870 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 ADGRF3Q8IZF5 1079 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 C16orf52Q8NHV5 167 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 NAT14Q8WUY8 206 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 DHX58Q96C10 678 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 MARK4Q96L34 752 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 DACH2Q96NX9 599 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 PSKH2Q96QS6 385 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 C12orf65Q9H3J6 166 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 FAM83DQ9H4H8 585 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 XKR8Q9H6D3 395 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 UPF2Q9HAU5 1272 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 METTL14Q9HCE5 456 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 TMEM59LQ9UK28 342 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 NXT1Q9UKK6 140 aaKnown RBP6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 KLHL20Q9Y2M5 609 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 KIAA1549Q9HCM3 1950 aa6.35□□□□□ -1.39
CTNNA1-216ENST00000519489 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 A0A0J9YYE9 177 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 PVALEFA0A1B0GWK0 134 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 GABRR3A8MPY1 467 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 QSOX1O00391 747 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 CES2O00748 559 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 DSCR3O14972 297 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 SLC16A3O15427 465 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 NDUFS7O75251 213 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 SLC25A12O75746 678 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 SLC25A14O95258 325 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 PRLP01236 227 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 TRBC1P01850 177 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 FPR1P21462 350 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 HALP42357 657 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 CARSP49589 748 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 AGFG1P52594 562 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 ATP11AP98196 1134 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 ZCWPW2Q504Y3 356 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 FAM120AOSQ5T036 256 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 C1orf185Q5T7R7 199 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 TLDC1Q6P9B6 456 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 NLRP9Q7RTR0 991 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 PPM1KQ8N3J5 372 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 LILRA3Q8N6C8 439 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 EMC1Q8N766 993 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 GPR26Q8NDV2 337 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 SEMA6DQ8NFY4 1073 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 TNIP2Q8NFZ5 429 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 RMDN2Q96LZ7 410 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 ZNF396Q96N95 335 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 PKP2Q99959 881 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 CINPQ9BW66 212 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 WWP1Q9H0M0 922 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 RIC8BQ9NVN3 520 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 ING1Q9UK53 422 aaPredicted RBP6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 STAP1Q9ULZ2 295 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 WBP11Q9Y2W2 641 aaKnown RBP6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 NOTCH3Q9UM47 2321 aa6.34□□□□□ -1.39
CTNNA1-216ENST00000519489 DSCAMO60469 2012 aa6.33□□□□□ -1.4
CTNNA1-216ENST00000519489 MED12Q93074 2177 aa6.33□□□□□ -1.4
CTNNA1-216ENST00000519489 IGLV3-12A0A075B6K2 115 aa6.33□□□□□ -1.4
CTNNA1-216ENST00000519489 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-216ENST00000519489 SH3D21A4FU49 640 aa6.33□□□□□ -1.4
CTNNA1-216ENST00000519489 BECN2A8MW95 431 aa6.33□□□□□ -1.4
CTNNA1-216ENST00000519489 SLC16A5O15375 505 aa6.33□□□□□ -1.4
CTNNA1-216ENST00000519489 TCF21O43680 179 aa6.33□□□□□ -1.4
CTNNA1-216ENST00000519489 ADAM11O75078 769 aa6.33□□□□□ -1.4
CTNNA1-216ENST00000519489 POP7O75817 140 aaKnown RBP6.33□□□□□ -1.4
CTNNA1-216ENST00000519489 SMNDC1O75940 238 aaKnown RBP eCLIP6.33□□□□□ -1.4
CTNNA1-216ENST00000519489 CDK14O94921 469 aa6.33□□□□□ -1.4
CTNNA1-216ENST00000519489 CREB1P16220 341 aa6.33□□□□□ -1.4
CTNNA1-216ENST00000519489 ZNF16P17020 682 aaPredicted RBP6.33□□□□□ -1.4
CTNNA1-216ENST00000519489 FSTP19883 344 aa6.33□□□□□ -1.4
CTNNA1-216ENST00000519489 EPHB2P29323 1055 aa6.33□□□□□ -1.4
CTNNA1-216ENST00000519489 ZNF136P52737 540 aa6.33□□□□□ -1.4
CTNNA1-216ENST00000519489 EMP2P54851 167 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms