RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 FAM71BQ8TC56 605 aa5.81□□□□□ -1.48
PABPC1-207ENST00000518716 PPP4R1Q8TF05 950 aa5.81□□□□□ -1.48
PABPC1-207ENST00000518716 CPT1BQ92523 772 aa5.81□□□□□ -1.48
PABPC1-207ENST00000518716 FER1L6-AS2Q96M78 137 aa5.81□□□□□ -1.48
PABPC1-207ENST00000518716 IP6K3Q96PC2 410 aa5.81□□□□□ -1.48
PABPC1-207ENST00000518716 CSPG4P5Q96PW8 444 aa5.81□□□□□ -1.48
PABPC1-207ENST00000518716 TRIB3Q96RU7 358 aa5.81□□□□□ -1.48
PABPC1-207ENST00000518716 WDR77Q9BQA1 342 aaPredicted RBP5.81□□□□□ -1.48
PABPC1-207ENST00000518716 TACO1Q9BSH4 297 aaKnown RBP5.81□□□□□ -1.48
PABPC1-207ENST00000518716 DHRS4Q9BTZ2 278 aa5.81□□□□□ -1.48
PABPC1-207ENST00000518716 ZSCAN5AQ9BUG6 496 aa5.81□□□□□ -1.48
PABPC1-207ENST00000518716 NUP85Q9BW27 656 aa5.81□□□□□ -1.48
PABPC1-207ENST00000518716 ILKAPQ9H0C8 392 aaPredicted RBP5.81□□□□□ -1.48
PABPC1-207ENST00000518716 OSGEPL1Q9H4B0 414 aa5.81□□□□□ -1.48
PABPC1-207ENST00000518716 NT5MQ9NPB1 228 aa5.81□□□□□ -1.48
PABPC1-207ENST00000518716 TAS2R14Q9NYV8 317 aa5.81□□□□□ -1.48
PABPC1-207ENST00000518716 AMACRQ9UHK6 382 aa5.81□□□□□ -1.48
PABPC1-207ENST00000518716 RABL2BQ9UNT1 228 aa5.81□□□□□ -1.48
PABPC1-207ENST00000518716 CSPG4Q6UVK1 2322 aa5.81□□□□□ -1.48
PABPC1-207ENST00000518716 VPS13CQ709C8 3753 aa5.81□□□□□ -1.48
PABPC1-207ENST00000518716 C1orf232A0A0U1RR37 186 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 PRPSAP2O60256 369 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 KLHL41O60662 606 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 MTX2O75431 263 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 CDK14O94921 469 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 UMODP07911 640 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 NAT2P11245 290 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 IMPDH2P12268 514 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 TCF4P15884 667 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 BPIP17213 487 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 PSMA2P25787 234 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 HTR1EP28566 365 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 PCK1P35558 622 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 KCNC1P48547 511 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 HMGA2P52926 109 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 OTUD4Q01804 1114 aaKnown RBP5.8□□□□□ -1.48
PABPC1-207ENST00000518716 GALNT2Q10471 571 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 INSCQ1MX18 579 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 PTCHD3Q3KNS1 767 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 TDRD12Q587J7 1177 aaKnown RBP5.8□□□□□ -1.48
PABPC1-207ENST00000518716 ANKRD20A8PQ5CZ79 823 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 TCP11X2Q5H9J9 407 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 METRNLQ641Q3 311 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 TXNRD3NBQ6F5E7 133 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 RPUSD3Q6P087 351 aaKnown RBP5.8□□□□□ -1.48
PABPC1-207ENST00000518716 DUS1LQ6P1R4 473 aaKnown RBP5.8□□□□□ -1.48
PABPC1-207ENST00000518716 KLHL35Q6PF15 583 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 DCUN1D2Q6PH85 259 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 FBXO38Q6PIJ6 1188 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 TMCO3Q6UWJ1 677 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 FJX1Q86VR8 437 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 RAB43Q86YS6 212 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 BBS5Q8N3I7 341 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 ATPAF2Q8N5M1 289 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 DTX3LQ8TDB6 740 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 COG1Q8WTW3 980 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 TM9SF4Q92544 642 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 NACC2Q96BF6 587 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 TADA1Q96BN2 335 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 CXorf40BQ96DE9 158 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 TSGA13Q96PP4 275 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 VPS35Q96QK1 796 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 AGPAT1Q99943 283 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 TREX2Q9BQ50 279 aaPredicted RBP5.8□□□□□ -1.48
PABPC1-207ENST00000518716 FAM167BQ9BTA0 163 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 KRTAP3-1Q9BYR8 98 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 PITPNM3Q9BZ71 974 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 POLR1EQ9GZS1 481 aaKnown RBP5.8□□□□□ -1.48
PABPC1-207ENST00000518716 ACTR5Q9H9F9 607 aaPredicted RBP5.8□□□□□ -1.48
PABPC1-207ENST00000518716 PCDH9Q9HC56 1237 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 SYTL2Q9HCH5 934 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 CHST11Q9NPF2 352 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 NLRC4Q9NPP4 1024 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 SAMSN1Q9NSI8 373 aaKnown RBP5.8□□□□□ -1.48
PABPC1-207ENST00000518716 HRASLS2Q9NWW9 162 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 P4HTMQ9NXG6 502 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 PKD2L2Q9NZM6 624 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 IP6K2Q9UHH9 426 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 ADAM30Q9UKF2 790 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 DNAJC16Q9Y2G8 782 aa5.8□□□□□ -1.48
PABPC1-207ENST00000518716 MAP1AP78559 2803 aaPredicted RBP5.79□□□□□ -1.48
PABPC1-207ENST00000518716 A0A1B0GTL3 188 aa5.79□□□□□ -1.48
PABPC1-207ENST00000518716 UBA6A0AVT1 1052 aaPredicted RBP5.79□□□□□ -1.48
PABPC1-207ENST00000518716 CCDC78A2IDD5 438 aa5.79□□□□□ -1.48
PABPC1-207ENST00000518716 SLC9B1P1A6NJY1 282 aa5.79□□□□□ -1.48
PABPC1-207ENST00000518716 DNAJA2O60884 412 aa5.79□□□□□ -1.48
PABPC1-207ENST00000518716 POP7O75817 140 aaKnown RBP5.79□□□□□ -1.48
PABPC1-207ENST00000518716 ATE1O95260 518 aa5.79□□□□□ -1.48
PABPC1-207ENST00000518716 ONECUT2O95948 504 aa5.79□□□□□ -1.48
PABPC1-207ENST00000518716 IGHEP01854 428 aa5.79□□□□□ -1.48
PABPC1-207ENST00000518716 HLA-DQB2P05538 268 aa5.79□□□□□ -1.48
PABPC1-207ENST00000518716 MTHFD1P11586 935 aaKnown RBP5.79□□□□□ -1.48
PABPC1-207ENST00000518716 SKILP12757 684 aa5.79□□□□□ -1.48
PABPC1-207ENST00000518716 CAPN3P20807 821 aa5.79□□□□□ -1.48
PABPC1-207ENST00000518716 OTX2P32243 289 aa5.79□□□□□ -1.48
PABPC1-207ENST00000518716 GABRA4P48169 554 aa5.79□□□□□ -1.48
PABPC1-207ENST00000518716 ARSEP51690 589 aa5.79□□□□□ -1.48
PABPC1-207ENST00000518716 CTSCP53634 463 aa5.79□□□□□ -1.48
PABPC1-207ENST00000518716 EPHB1P54762 984 aa5.79□□□□□ -1.48
PABPC1-207ENST00000518716 TPD52P55327 224 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms