RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.93□□□□□ -0.66
TRAPPC9-203ENST00000517667 MAU2Q9Y6X3 613 aa10.93□□□□□ -0.66
TRAPPC9-203ENST00000517667 IGHV1-45A0A0A0MS14 117 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 SLC5A10A0PJK1 596 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 TARM1B6A8C7 271 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 BHMG1C9JSJ3 638 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 CCL22O00626 93 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 PRPF4O43172 522 aaKnown RBP eCLIP10.92□□□□□ -0.663e-6■■■■□ 20.5
TRAPPC9-203ENST00000517667 PSTPIP1O43586 416 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 SPOPO43791 374 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 F10P00742 488 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 OR56A5P0C7T3 313 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 TNNT1P13805 278 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 FBLP22087 321 aaKnown RBP10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 KIR3DL1P43629 444 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 VSX2P58304 361 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 BRD3Q15059 726 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 SF1Q15637 639 aaKnown RBP10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 DBN1Q16643 649 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 KRTCAP3Q53RY4 240 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 WASHC2DQ5SRD0 308 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 Q6ZPB1 254 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 PRSS58Q8IYP2 241 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 EID3Q8N140 333 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 ACBD4Q8NC06 268 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 OR2L8Q8NGY9 312 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 ADAMTS18Q8TE60 1221 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 MESP1Q9BRJ9 268 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 RAB11FIP5Q9BXF6 653 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 ARNT2Q9HBZ2 717 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 C14orf105Q9NVL8 296 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 NLE1Q9NVX2 485 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 ZNF835Q9Y2P0 537 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 MEMO1Q9Y316 297 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 PCDHGB6Q9Y5F9 930 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 NAV3Q8IVL0 2385 aa10.92□□□□□ -0.66
TRAPPC9-203ENST00000517667 IDSB3KWA1 339 aa10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 STK10O94804 968 aaKnown RBP10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 ZRANB2O95218 330 aaKnown RBP eCLIP10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 GYPCP04921 128 aa10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 PSMB4P28070 264 aa10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 GRIA3P42263 894 aa10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 EMP2P54851 167 aa10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 EEF1A2Q05639 463 aaKnown RBP10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 ZNF33BQ06732 778 aa10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 OLIG2Q13516 323 aa10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 MUM1Q2TAK8 710 aa10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 ZNF766Q5HY98 468 aa10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 SPPL2CQ8IUH8 684 aa10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 DCUN1D3Q8IWE4 304 aa10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 SLC22A15Q8IZD6 547 aa10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 PHF10Q8WUB8 498 aaKnown RBP10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 HAUS1Q96CS2 278 aa10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 MVB12AQ96EY5 273 aa10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 GPR137Q96N19 417 aa10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 TREX2Q9BQ50 279 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 TBL1YQ9BQ87 522 aa10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 MENTQ9BUN1 341 aa10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 CDC14AQ9UNH5 594 aa10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 KLK4Q9Y5K2 254 aa10.91□□□□□ -0.66
TRAPPC9-203ENST00000517667 hCG_1818297A0A087WSY0 165 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 H7C0C1 242 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 APOC4-APOC2K7ER74 178 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 RASGRF2O14827 1237 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 AKR1B10O60218 316 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 NADKO95544 446 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 APOC2P02655 101 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 HEXBP07686 556 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 PRSS56P0CW18 603 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 ERVK-10P10266 1014 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 ITGAMP11215 1152 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 RBL1P28749 1068 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 ATP5OP48047 213 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 ART1P52961 327 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 EMP3P54852 163 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 TPM4P67936 248 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 CSNK1G2P78368 415 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 PMP22Q01453 160 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 DSG2Q14126 1118 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 NAA25Q14CX7 972 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 CDSNQ15517 529 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 ANKRD20A2Q5SQ80 823 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 ANKRD20A1Q5TYW2 823 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 ANKRD20A3Q5VUR7 823 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 DENND5AQ6IQ26 1287 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 UNC5DQ6UXZ4 953 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 MEX3BQ6ZN04 569 aaKnown RBP10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 ARHGEF18Q6ZSZ5 1173 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 NEK10Q6ZWH5 1172 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 TAX1BP1Q86VP1 789 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 CCDC50Q8IVM0 306 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 PIANPQ8IYJ0 282 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 RAB42Q8N4Z0 105 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 CA5BP1Q8WTZ4 195 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 ASZ1Q8WWH4 475 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 CDKN2AIPNLQ96HQ2 116 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 ALS2CR12Q96Q35 445 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 TUBB6Q9BUF5 446 aa10.9□□□□□ -0.66
TRAPPC9-203ENST00000517667 TSSK1BQ9BXA7 367 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms