RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 PCDHB11Q9Y5F2 797 aa20.27■□□□□ 0.84
LSM6-207ENST00000515311 MN1Q10571 1320 aaPredicted RBP20.27■□□□□ 0.83
LSM6-207ENST00000515311 UNC13CQ8NB66 2214 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 A0A1W2PQM1 296 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 GSAPA4D1B5 854 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 H3BQF6 201 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 BIRC5O15392 142 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 RFPL3O75679 317 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 WDR47O94967 919 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 CPNE6O95741 557 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 BPGMP07738 259 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 CDK4P11802 303 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 NR1D1P20393 614 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 IMPDH1P20839 514 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 CSF2RBP32927 897 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 PIK3CGP48736 1102 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 E2F1Q01094 437 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 ASPHQ12797 758 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 PRAMEF13Q5VWM6 474 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 SUSD1Q6UWL2 747 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 TAX1BP1Q86VP1 789 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 THOC6Q86W42 341 aaKnown RBP20.26■□□□□ 0.83
LSM6-207ENST00000515311 ANKRD42Q8N9B4 389 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 LMNTD1Q8N9Z9 388 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 OR2A1Q8NGT9 310 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 NCSTNQ92542 709 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 ZDHHC12Q96GR4 267 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 OR2A14Q96R47 310 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 CD180Q99467 661 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 MIPEPQ99797 713 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 HAUS8Q9BT25 410 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 INTS7Q9NVH2 962 aaKnown RBP20.26■□□□□ 0.83
LSM6-207ENST00000515311 TOR4AQ9NXH8 423 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 OPTCQ9UBM4 332 aa20.26■□□□□ 0.83
LSM6-207ENST00000515311 ISM1B1AKI9 464 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 K7EPI3 171 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 NTN3O00634 580 aaPredicted RBP20.25■□□□□ 0.83
LSM6-207ENST00000515311 CCNDBP1O95273 360 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 SIX3O95343 332 aaPredicted RBP20.25■□□□□ 0.83
LSM6-207ENST00000515311 C9P02748 559 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 RPS17P08708 135 aaKnown RBP20.25■□□□□ 0.83
LSM6-207ENST00000515311 CEACAM1P13688 526 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 UGT2B7P16662 529 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 EEF1DP29692 281 aaKnown RBP20.25■□□□□ 0.83
LSM6-207ENST00000515311 PRDX3P30048 256 aaKnown RBP20.25■□□□□ 0.83
LSM6-207ENST00000515311 GDF5P43026 501 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 PPM1FP49593 454 aaPredicted RBP20.25■□□□□ 0.83
LSM6-207ENST00000515311 NAA20P61599 178 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 TSTA3Q13630 321 aaPredicted RBP20.25■□□□□ 0.83
LSM6-207ENST00000515311 SLC5A12Q1EHB4 618 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 THEMIS2Q5TEJ8 643 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 HHATQ5VTY9 493 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 LIPMQ5VYY2 423 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 SPESP1Q6UW49 350 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 LCTLQ6UWM7 567 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 C10orf107Q8IVU9 208 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 CARFQ8N187 725 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 SREK1Q8WXA9 508 aaKnown RBP20.25■□□□□ 0.83
LSM6-207ENST00000515311 FAM122AQ96E09 287 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 TMEM237Q96Q45 408 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 OR4K3Q96R72 315 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 DNAJC11Q9NVH1 559 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 TAC3Q9UHF0 121 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 SLC22A14Q9Y267 594 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 ASB1Q9Y576 335 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 PIEZO1Q92508 2521 aa20.25■□□□□ 0.83
LSM6-207ENST00000515311 SNRNP200O75643 2136 aaKnown RBP20.24■□□□□ 0.83
LSM6-207ENST00000515311 E2F3O00716 465 aa20.24■□□□□ 0.83
LSM6-207ENST00000515311 CAPN5O15484 640 aaPredicted RBP20.24■□□□□ 0.83
LSM6-207ENST00000515311 CCNT2O60583 730 aaKnown RBP20.24■□□□□ 0.83
LSM6-207ENST00000515311 NPPBP16860 134 aa20.24■□□□□ 0.83
LSM6-207ENST00000515311 ALDH3A1P30838 453 aa20.24■□□□□ 0.83
LSM6-207ENST00000515311 PLA2G5P39877 138 aa20.24■□□□□ 0.83
LSM6-207ENST00000515311 WDR4P57081 412 aaKnown RBP20.24■□□□□ 0.83
LSM6-207ENST00000515311 ABATP80404 500 aa20.24■□□□□ 0.83
LSM6-207ENST00000515311 CFHR1Q03591 330 aa20.24■□□□□ 0.83
LSM6-207ENST00000515311 PRDX1Q06830 199 aaKnown RBP20.24■□□□□ 0.83
LSM6-207ENST00000515311 SF1Q15637 639 aaKnown RBP20.24■□□□□ 0.83
LSM6-207ENST00000515311 PDK4Q16654 411 aa20.24■□□□□ 0.83
LSM6-207ENST00000515311 FBXO48Q5FWF7 155 aa20.24■□□□□ 0.83
LSM6-207ENST00000515311 ZNF678Q5SXM1 525 aa20.24■□□□□ 0.83
LSM6-207ENST00000515311 ICE2Q659A1 982 aa20.24■□□□□ 0.83
LSM6-207ENST00000515311 IRGCQ6NXR0 463 aa20.24■□□□□ 0.83
LSM6-207ENST00000515311 USP53Q70EK8 1073 aa20.24■□□□□ 0.83
LSM6-207ENST00000515311 OR2L3Q8NG85 312 aa20.24■□□□□ 0.83
LSM6-207ENST00000515311 ESAMQ96AP7 390 aa20.24■□□□□ 0.83
LSM6-207ENST00000515311 GFM1Q96RP9 751 aaKnown RBP20.24■□□□□ 0.83
LSM6-207ENST00000515311 CAPS2Q9BXY5 557 aa20.24■□□□□ 0.83
LSM6-207ENST00000515311 PITPNM3Q9BZ71 974 aa20.24■□□□□ 0.83
LSM6-207ENST00000515311 ABCG4Q9H172 646 aa20.24■□□□□ 0.83
LSM6-207ENST00000515311 GPRC5BQ9NZH0 403 aa20.24■□□□□ 0.83
LSM6-207ENST00000515311 PCTPQ9UKL6 214 aa20.24■□□□□ 0.83
LSM6-207ENST00000515311 COL27A1Q8IZC6 1860 aaPredicted RBP20.24■□□□□ 0.83
LSM6-207ENST00000515311 TLCD2A6NGC4 264 aa20.23■□□□□ 0.83
LSM6-207ENST00000515311 LRRC14BA6NHZ5 514 aa20.23■□□□□ 0.83
LSM6-207ENST00000515311 D6RAR5 112 aa20.23■□□□□ 0.83
LSM6-207ENST00000515311 TRIM13O60858 407 aa20.23■□□□□ 0.83
LSM6-207ENST00000515311 DKK1O94907 266 aa20.23■□□□□ 0.83
LSM6-207ENST00000515311 PSMB5P28074 263 aa20.23■□□□□ 0.83
LSM6-207ENST00000515311 PPP1CAP62136 330 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms