RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 MRGPRX3Q96LB0 322 aa14.44□□□□□ -0.1
NUP54-217ENST00000514987 RBM4BQ9BQ04 359 aaKnown RBP14.44□□□□□ -0.1
NUP54-217ENST00000514987 RBM4Q9BWF3 364 aaKnown RBP14.44□□□□□ -0.1
NUP54-217ENST00000514987 OSBPL10Q9BXB5 764 aa14.44□□□□□ -0.1
NUP54-217ENST00000514987 EPHX3Q9H6B9 360 aa14.44□□□□□ -0.1
NUP54-217ENST00000514987 RUVBL1Q9Y265 456 aaKnown RBP14.44□□□□□ -0.1
NUP54-217ENST00000514987 V9GYQ6 96 aa14.44□□□□□ -0.1
NUP54-217ENST00000514987 PTPRSQ13332 1948 aa14.44□□□□□ -0.1
NUP54-217ENST00000514987 A0A1B0GTW7 788 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 ZBBXA8MT70 800 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 RFXANKO14593 260 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 GNGT2O14610 69 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 ZNF197O14709 1029 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 SGTAO43765 313 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 TRMUO75648 421 aaKnown RBP14.43□□□□□ -0.1
NUP54-217ENST00000514987 SNAP29O95721 258 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 CST1P01037 141 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 HOXB9P17482 250 aaPredicted RBP14.43□□□□□ -0.1
NUP54-217ENST00000514987 KIR3DL1P43629 444 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 GZMMP51124 257 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 ERVFC1P60507 584 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 BIRC2Q13490 618 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 DUOXA1Q1HG43 343 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 ZXDCQ2QGD7 858 aaPredicted RBP14.43□□□□□ -0.1
NUP54-217ENST00000514987 PGS1Q32NB8 556 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 ERICH5Q6P6B1 374 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 SERPINA13PQ6UXR4 307 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 GCNT7Q6ZNI0 430 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 Q6ZVL8 140 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 TECPR1Q7Z6L1 1165 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 SERPINA11Q86U17 422 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 ZCCHC7Q8N3Z6 543 aaKnown RBP14.43□□□□□ -0.1
NUP54-217ENST00000514987 FBXO30Q8TB52 745 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 NUDT8Q8WV74 236 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 SCAMP4Q969E2 229 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 GLYATL1Q969I3 302 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 NCLNQ969V3 563 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 FBXL20Q96IG2 436 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 CNDP2Q96KP4 475 aaKnown RBP14.43□□□□□ -0.1
NUP54-217ENST00000514987 FOPNLQ96NB1 174 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 CCM2Q9BSQ5 444 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 RIOK2Q9BVS4 552 aaKnown RBP14.43□□□□□ -0.1
NUP54-217ENST00000514987 BRF2Q9HAW0 419 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 DDX18Q9NVP1 670 aaKnown RBP14.43□□□□□ -0.1
NUP54-217ENST00000514987 FAM120CQ9NX05 1096 aaKnown RBP14.43□□□□□ -0.1
NUP54-217ENST00000514987 FBXO10Q9UK96 956 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 H0YIV9 168 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 CLGNO14967 610 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 AREL1O15033 823 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 PRKD3O94806 890 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 MT-ND1P03886 318 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 HLCSP50747 726 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 NEK2P51955 445 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 PON2Q15165 354 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 RFX4Q33E94 735 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 LRRC73Q5JTD7 316 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 OTUD3Q5T2D3 398 aaPredicted RBP14.43□□□□□ -0.1
NUP54-217ENST00000514987 C10orf62Q5T681 223 aaPredicted RBP14.43□□□□□ -0.1
NUP54-217ENST00000514987 PLPP4Q5VZY2 271 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 GRHL2Q6ISB3 625 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 TBPL2Q6SJ96 375 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 THOC6Q86W42 341 aaKnown RBP14.43□□□□□ -0.1
NUP54-217ENST00000514987 SYT12Q8IV01 421 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 PGBD3Q8N328 593 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 ZNF555Q8NEP9 628 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 OR5K1Q8NHB7 308 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 CLHC1Q8NHS4 586 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 ZNF420Q8TAQ5 688 aaPredicted RBP14.43□□□□□ -0.1
NUP54-217ENST00000514987 APIPQ96GX9 242 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 TSSK3Q96PN8 268 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 TUBA1CQ9BQE3 449 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 LINC00597Q9H2U6 94 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 IKZF5Q9H5V7 419 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 TLR9Q9NR96 1032 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 GPRC5BQ9NZH0 403 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 VPS29Q9UBQ0 182 aa14.43□□□□□ -0.1
NUP54-217ENST00000514987 SAMD4AQ9UPU9 718 aaKnown RBP14.43□□□□□ -0.1
NUP54-217ENST00000514987 TTC34A8MYJ7 566 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 H0Y858 1186 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 SEC24DO94855 1032 aaPredicted RBP14.42□□□□□ -0.1
NUP54-217ENST00000514987 CCNDBP1O95273 360 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 FGBP02675 491 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 POU2F2P09086 479 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 SYN1P17600 705 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 ITPKAP23677 461 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 SLC5A2P31639 672 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 BMPR1AP36894 532 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 MMP12P39900 470 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 ETV3P41162 512 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 ASMTP46597 345 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 GJA8P48165 433 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 PRLHRP49683 370 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 CDH15P55291 814 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 ST8SIA6P61647 398 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 PHC1P78364 1004 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 UBE3AQ05086 875 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 LRRC74AQ0VAA2 488 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 PYCR3Q53H96 274 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 XKR6Q5GH73 641 aa14.42□□□□□ -0.1
NUP54-217ENST00000514987 RBM48Q5RL73 367 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms