RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 C8orf82Q6P1X6 216 aaPredicted RBP12.44□□□□□ -0.42
PVT1-203ENST00000513868 SUSD1Q6UWL2 747 aa12.44□□□□□ -0.42
PVT1-203ENST00000513868 C16orf89Q6UX73 402 aa12.44□□□□□ -0.42
PVT1-203ENST00000513868 PGAM4Q8N0Y7 254 aa12.44□□□□□ -0.42
PVT1-203ENST00000513868 PGBD3Q8N328 593 aa12.44□□□□□ -0.42
PVT1-203ENST00000513868 RNF175Q8N4F7 328 aa12.44□□□□□ -0.42
PVT1-203ENST00000513868 EFCAB3Q8N7B9 438 aa12.44□□□□□ -0.42
PVT1-203ENST00000513868 TMEM145Q8NBT3 493 aa12.44□□□□□ -0.42
PVT1-203ENST00000513868 OR1E3Q8WZA6 343 aa12.44□□□□□ -0.42
PVT1-203ENST00000513868 WDR34Q96EX3 536 aa12.44□□□□□ -0.42
PVT1-203ENST00000513868 FRG2BQ96QU4 278 aa12.44□□□□□ -0.42
PVT1-203ENST00000513868 MRPL1Q9BYD6 325 aaKnown RBP12.44□□□□□ -0.42
PVT1-203ENST00000513868 ELOVL6Q9H5J4 265 aa12.44□□□□□ -0.42
PVT1-203ENST00000513868 LTB4R2Q9NPC1 389 aa12.44□□□□□ -0.42
PVT1-203ENST00000513868 NOP53Q9NZM5 478 aaKnown RBP12.44□□□□□ -0.42
PVT1-203ENST00000513868 ZIM2Q9NZV7 527 aa12.44□□□□□ -0.42
PVT1-203ENST00000513868 MAP10Q9P2G4 905 aa12.44□□□□□ -0.42
PVT1-203ENST00000513868 WNT16Q9UBV4 365 aa12.44□□□□□ -0.42
PVT1-203ENST00000513868 BAIAP2L1Q9UHR4 511 aa12.44□□□□□ -0.42
PVT1-203ENST00000513868 GPSM3Q9Y4H4 160 aa12.44□□□□□ -0.42
PVT1-203ENST00000513868 COL6A3P12111 3177 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 GON4LQ3T8J9 2241 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 ASPDHA6ND91 283 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 H0YIV9 168 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 IFRD1O00458 451 aaPredicted RBP12.43□□□□□ -0.42
PVT1-203ENST00000513868 NR5A2O00482 541 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 CLGNO14967 610 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 SCAMP1O15126 338 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 SLC22A3O75751 556 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 RSL1D1O76021 490 aaKnown RBP12.43□□□□□ -0.42
PVT1-203ENST00000513868 APBB3O95704 486 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 SLC35G4P0C7Q5 338 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 GNAZP19086 355 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 VARSP26640 1264 aaKnown RBP12.43□□□□□ -0.42
PVT1-203ENST00000513868 HNF4AP41235 474 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 MTTPP55157 894 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 RPL38P63173 70 aaKnown RBP12.43□□□□□ -0.42
PVT1-203ENST00000513868 ZP2Q05996 745 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 ART3Q13508 389 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 RCAN2Q14206 197 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 LRRC32Q14392 662 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 CLCA4Q14CN2 919 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 VPS26BQ4G0F5 336 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 CATSPEREQ5SY80 951 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 CYP20A1Q6UW02 462 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 NET1Q7Z628 596 aaPredicted RBP12.43□□□□□ -0.42
PVT1-203ENST00000513868 ZFAND4Q86XD8 727 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 TBC1D21Q8IYX1 336 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 FRMD1Q8N878 549 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 TSPEARQ8WU66 669 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 PDXPQ96GD0 296 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 TOE1Q96GM8 510 aaKnown RBP12.43□□□□□ -0.42
PVT1-203ENST00000513868 FOXQ1Q9C009 403 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 WDR41Q9HAD4 459 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 LRTM1Q9HBL6 345 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 TMEM45AQ9NWC5 275 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 ASIC5Q9NY37 505 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 WSB2Q9NYS7 404 aaPredicted RBP12.43□□□□□ -0.42
PVT1-203ENST00000513868 MOSPD1Q9UJG1 213 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 CYP8B1Q9UNU6 501 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 TDRKHQ9Y2W6 561 aaKnown RBP12.43□□□□□ -0.42
PVT1-203ENST00000513868 POLR3HQ9Y535 204 aaPredicted RBP12.43□□□□□ -0.42
PVT1-203ENST00000513868 PCDHGA7Q9Y5G6 932 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 HS3ST3A1Q9Y663 406 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 KCNE2Q9Y6J6 123 aa12.43□□□□□ -0.42
PVT1-203ENST00000513868 MRASO14807 208 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 SEC22BO75396 215 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 PDE5AO76074 875 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 RPN2P04844 631 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 CCR5P51681 352 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 ZNF33BQ06732 778 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 TP53BP1Q12888 1972 aaPredicted RBP12.42□□□□□ -0.42
PVT1-203ENST00000513868 MDC1Q14676 2089 aaKnown RBP12.42□□□□□ -0.42
PVT1-203ENST00000513868 ARHGAP19Q14CB8 494 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 CYP2A13Q16696 494 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 IMPG1Q17R60 797 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 MMEL1Q495T6 779 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 PIGGQ5H8A4 983 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 KIAA0895LQ68EN5 471 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 ADNP2Q6IQ32 1131 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 ENPP7Q6UWV6 458 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 HACD2Q6Y1H2 254 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 HPS6Q86YV9 775 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 ADHFE1Q8IWW8 467 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 FBXW8Q8N3Y1 598 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 SETD7Q8WTS6 366 aaKnown RBP12.42□□□□□ -0.42
PVT1-203ENST00000513868 NUDT8Q8WV74 236 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 C12orf66Q96MD2 445 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 WDR92Q96MX6 357 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 HHIPQ96QV1 700 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 OR2M4Q96R27 311 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 TRIT1Q9H3H1 467 aaKnown RBP12.42□□□□□ -0.42
PVT1-203ENST00000513868 OSGEPL1Q9H4B0 414 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 CARS2Q9HA77 564 aaKnown RBP12.42□□□□□ -0.42
PVT1-203ENST00000513868 CCDC177Q9NQR7 707 aaPredicted RBP12.42□□□□□ -0.42
PVT1-203ENST00000513868 C1orf109Q9NX04 203 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 PRPF19Q9UMS4 504 aaKnown RBP12.42□□□□□ -0.42
PVT1-203ENST00000513868 A0A1W2PP18 115 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 FAM170BA6NMN3 283 aa12.42□□□□□ -0.42
PVT1-203ENST00000513868 BBIP1A8MTZ0 92 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms