RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 GDF9O60383 454 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 NPHS1O60500 1241 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 LDOC1O95751 146 aaPredicted RBP12.11□□□□□ -0.47
PDPN-210ENST00000513143 PROS1P07225 676 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 NPPBP16860 134 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 PEBP1P30086 187 aaKnown RBP12.11□□□□□ -0.47
PDPN-210ENST00000513143 PIK3CGP48736 1102 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 CLCQ05315 142 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 GTF2H2Q13888 395 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 KIR2DS3Q14952 304 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 CFAP157Q5JU67 520 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 RIF1Q5UIP0 2472 aaKnown RBP12.11□□□□□ -0.47
PDPN-210ENST00000513143 PRAMEF13Q5VWM6 474 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 CES4AQ5XG92 561 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 GTF2H2CQ6P1K8 395 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 KLHL35Q6PF15 583 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 LCTLQ6UWM7 567 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 RPS27LQ71UM5 84 aaKnown RBP12.11□□□□□ -0.47
PDPN-210ENST00000513143 GOLGA7Q7Z5G4 137 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 MTERF4Q7Z6M4 381 aaKnown RBP12.11□□□□□ -0.47
PDPN-210ENST00000513143 OOSP2Q86WS3 158 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 NAXDQ8IW45 347 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 TEX9Q8N6V9 391 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 OR2A1Q8NGT9 310 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 PPP1R14CQ8TAE6 165 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 PPP4R1Q8TF05 950 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 ZNF75CPQ92670 426 aaPredicted RBP12.11□□□□□ -0.47
PDPN-210ENST00000513143 CCDC74AQ96AQ1 378 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 SLC22A18Q96BI1 424 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 CNDP2Q96KP4 475 aaKnown RBP12.11□□□□□ -0.47
PDPN-210ENST00000513143 MAGEB18Q96M61 343 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 NSUN5Q96P11 429 aaKnown RBP12.11□□□□□ -0.47
PDPN-210ENST00000513143 TRMOQ9BU70 441 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 DRC3Q9H069 523 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 RAB33BQ9H082 229 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 EPB41L1Q9H4G0 881 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 MANSC1Q9H8J5 431 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 ACSS2Q9NR19 701 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 DNAJC11Q9NVH1 559 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 SPHK1Q9NYA1 384 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 KCNK4Q9NYG8 393 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 OGFRQ9NZT2 677 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 PCDHB11Q9Y5F2 797 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 ENTPD2Q9Y5L3 495 aa12.11□□□□□ -0.47
PDPN-210ENST00000513143 IGHV1OR21-1A0A087WYE8 117 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 CPED1A4D0V7 1026 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 PCNX2A6NKB5 2137 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 TMEM114B3SHH9 223 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 MATN2O00339 956 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 POLR3GO15318 223 aaPredicted RBP12.1□□□□□ -0.47
PDPN-210ENST00000513143 ZW10O43264 779 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 B4GAT1O43505 415 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 SH3BP5O60239 455 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 CBFA2T3O75081 653 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 MLYCDO95822 493 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 EPB42P16452 691 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 CKMT2P17540 419 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 TYRP1P17643 537 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 AMD1P17707 334 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 EPORP19235 508 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 POLR2CP19387 275 aaPredicted RBP12.1□□□□□ -0.47
PDPN-210ENST00000513143 ALDH4A1P30038 563 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 ARRB2P32121 409 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 SERPINB5P36952 375 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 GYS2P54840 703 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 CDH13P55290 713 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 OR1D5P58170 312 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 GPLD1P80108 840 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 DAB2P98082 770 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 GUCY1A3Q02108 690 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 PCDH1Q08174 1060 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 GALNT1Q10472 559 aaPredicted RBP12.1□□□□□ -0.47
PDPN-210ENST00000513143 BST1Q10588 318 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 CDC16Q13042 620 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 STX3Q13277 289 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 TSTA3Q13630 321 aaPredicted RBP12.1□□□□□ -0.47
PDPN-210ENST00000513143 RCN2Q14257 317 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 PERM1Q5SV97 790 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 STPG1Q5TH74 334 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 ATG16L1Q676U5 607 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 RGS9BPQ6ZS82 235 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 EFL1Q7Z2Z2 1120 aaKnown RBP12.1□□□□□ -0.47
PDPN-210ENST00000513143 SPRED1Q7Z699 444 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 OR10G6Q8NH81 332 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 FLVCR1-AS1Q8TAF5 88 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 BAHD1Q8TBE0 780 aaPredicted RBP12.1□□□□□ -0.47
PDPN-210ENST00000513143 LRRC8CQ8TDW0 803 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 RSC1A1Q92681 617 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 OR2A14Q96R47 310 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 HAUS8Q9BT25 410 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 CAPS2Q9BXY5 557 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 CCDC134Q9H6E4 229 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 IPPKQ9H8X2 491 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 HRASLS2Q9NWW9 162 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 ACTR10Q9NZ32 417 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 GPRC5BQ9NZH0 403 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 FTSJ1Q9UET6 329 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 TAC3Q9UHF0 121 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 ANGPTL3Q9Y5C1 460 aa12.1□□□□□ -0.47
PDPN-210ENST00000513143 KCNE2Q9Y6J6 123 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms