RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 AKAP11Q9UKA4 1901 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 MYH2Q9UKX2 1941 aa4.05□□□□□ -1.76
HTT-210ENST00000512909 RFX7Q2KHR2 1363 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 CCDC171Q6TFL3 1326 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 MYH13Q9UKX3 1938 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 KBTBD13C9JR72 458 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 MEIS2O14770 477 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 ADAMDEC1O15204 470 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 EIF3DO15371 548 aaKnown RBP eCLIP4.04□□□□□ -1.76
HTT-210ENST00000512909 DIAPH2O60879 1101 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 TBCAO75347 108 aaKnown RBP4.04□□□□□ -1.76
HTT-210ENST00000512909 H1F0P07305 194 aaKnown RBP4.04□□□□□ -1.76
HTT-210ENST00000512909 GOLGA8HP0CJ92 632 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 TOP1P11387 765 aaKnown RBP4.04□□□□□ -1.76
HTT-210ENST00000512909 FGF3P11487 239 aaPredicted RBP4.04□□□□□ -1.76
HTT-210ENST00000512909 CDH1P12830 882 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 PFKFB1P16118 471 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 ZNF12P17014 697 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 TRIM21P19474 475 aaKnown RBP4.04□□□□□ -1.76
HTT-210ENST00000512909 EEF1B2P24534 225 aaKnown RBP4.04□□□□□ -1.76
HTT-210ENST00000512909 HSPB3Q12988 150 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 ALX1Q15699 326 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 TCP11X2Q5H9J9 407 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 C6orf163Q5TEZ5 329 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 KLC3Q6P597 504 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 CASC1Q6TDU7 716 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 PACS1Q6VY07 963 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 KCTD8Q6ZWB6 473 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 TUBA1AQ71U36 451 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 CHST3Q7LGC8 479 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 ZNF589Q86UQ0 364 aaPredicted RBP4.04□□□□□ -1.76
HTT-210ENST00000512909 IQCHQ86VS3 1027 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 IQCA1Q86XH1 822 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 DMBX1Q8NFW5 382 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 EXD1Q8NHP7 514 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 PTPMT1Q8WUK0 201 aaPredicted RBP4.04□□□□□ -1.76
HTT-210ENST00000512909 TEKT4Q8WW24 435 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 CD101Q93033 1021 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 LINGO1Q96FE5 620 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 IL17FQ96PD4 163 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 TUBA1CQ9BQE3 449 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 UBAC1Q9BSL1 405 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 PANK2Q9BZ23 570 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 KRT23Q9C075 422 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 C11orf49Q9H6J7 331 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 CD93Q9NPY3 652 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 CCDC177Q9NQR7 707 aaPredicted RBP4.04□□□□□ -1.76
HTT-210ENST00000512909 ABCF3Q9NUQ8 709 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 CCPG1Q9ULG6 757 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 OR2W1Q9Y3N9 320 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 TMEM184BQ9Y519 407 aaPredicted RBP4.04□□□□□ -1.76
HTT-210ENST00000512909 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.04□□□□□ -1.76
HTT-210ENST00000512909 COL2A1P02458 1487 aaPredicted RBP4.04□□□□□ -1.76
HTT-210ENST00000512909 EVPLQ92817 2033 aa4.04□□□□□ -1.76
HTT-210ENST00000512909 LOC102723996A0A087X1L8 192 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 TCRBV21S2A2A0A5A6 115 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 C16orf97H3BN30 126 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 IFIT3O14879 490 aaKnown RBP4.03□□□□□ -1.76
HTT-210ENST00000512909 GPR137BO60478 399 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 PGK1P00558 417 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 ERCC2P18074 760 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 CHMLP26374 656 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 CALML3P27482 149 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 PCGF2P35227 344 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 COPB2P35606 906 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 SLC9A3P48764 834 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 FOXG1P55316 489 aaPredicted RBP4.03□□□□□ -1.76
HTT-210ENST00000512909 CNTN2Q02246 1040 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 ALCAMQ13740 583 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 SNTB1Q13884 538 aaKnown RBP4.03□□□□□ -1.76
HTT-210ENST00000512909 USH1GQ495M9 461 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 FAM133BQ5BKY9 247 aaKnown RBP4.03□□□□□ -1.76
HTT-210ENST00000512909 GCNT6Q5T4J0 391 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 ERMARDQ5T6L9 678 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 ZNF324BQ6AW86 544 aaPredicted RBP4.03□□□□□ -1.76
HTT-210ENST00000512909 TMEM211Q6ICI0 200 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 FAM171BQ6P995 826 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 ZNF534Q76KX8 674 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 CAMKMTQ7Z624 323 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 NRROSQ86YC3 692 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 MFN1Q8IWA4 741 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 POC1AQ8NBT0 407 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 NEXN-AS1Q8NBZ9 246 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 SMRP1Q8NCR6 262 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 OR6J1Q8NGC5 347 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 OR13A1Q8NGR1 328 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 OR52I2Q8NH67 350 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 OR5R1Q8NH85 324 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 BBS10Q8TAM1 723 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 HDAC11Q96DB2 347 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 RMDN1Q96DB5 314 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 SPACA9Q96E40 222 aaPredicted RBP4.03□□□□□ -1.76
HTT-210ENST00000512909 RADILQ96JH8 1075 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 TTC14Q96N46 770 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 MS4A10Q96PG2 267 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 GBP5Q96PP8 586 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 POLR3CQ9BUI4 534 aaPredicted RBP4.03□□□□□ -1.76
HTT-210ENST00000512909 TEX13BQ9BXU2 312 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 TRPC7Q9HCX4 862 aa4.03□□□□□ -1.76
HTT-210ENST00000512909 FAM118AQ9NWS6 357 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms