RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 COL6A6A6NMZ7 2263 aa15.51■□□□□ 0.07
PDLIM5-216ENST00000511767 EIF4E1BA6NMX2 242 aaKnown RBP15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 E7ENX8 843 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 EIF3HO15372 352 aaKnown RBP eCLIP15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 SLC16A8O95907 504 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 PRKAR1AP10644 381 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 PTPN4P29074 926 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 GCGRP47871 477 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 PGGT1BP53609 377 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 PNLIPRP1P54315 467 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 RPS15P62841 145 aaKnown RBP15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 TAP2Q03519 686 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 CALCOCO2Q13137 446 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 ERV3-1Q14264 604 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 DEFB110Q30KQ9 67 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 ATP1A1-AS1Q5TC04 95 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 HECTD2Q5U5R9 776 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 TLDC1Q6P9B6 456 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 SUSD1Q6UWL2 747 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 CYS1Q717R9 158 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 ZBED8Q8IZ13 594 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 PYROXD1Q8WU10 500 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 ZNF480Q8WV37 535 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 N4BP2L2Q92802 583 aaPredicted RBP15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 ZNF285Q96NJ3 590 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 MIPEPQ99797 713 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 INTS7Q9NVH2 962 aaKnown RBP15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 TRMT6Q9UJA5 497 aaKnown RBP15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 ADAMTS6Q9UKP5 1117 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 UTP11Q9Y3A2 253 aaKnown RBP15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 PSAT1Q9Y617 370 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 CFAP46Q8IYW2 2715 aa15.5■□□□□ 0.07
PDLIM5-216ENST00000511767 SRPX2O60687 465 aaPredicted RBP15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 CTSVO60911 334 aa15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 URI1O94763 535 aaPredicted RBP15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 TSPAN12O95859 305 aa15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 RAB40ALP0C0E4 278 aa15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 PSMB5P28074 263 aa15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 SSTR1P30872 391 aa15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 PLTPP55058 493 aa15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 PRDX1Q06830 199 aaKnown RBP15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 CDC20Q12834 499 aa15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 DEFB109BQ30KR1 87 aa15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 ZC3H12BQ5HYM0 836 aaKnown RBP15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 RHBDD2Q6NTF9 364 aa15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 BORAQ6PGQ7 559 aa15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 UBE2R2Q712K3 238 aaPredicted RBP15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 PALM2Q8IXS6 379 aa15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 ZNF843Q8N446 348 aa15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 ZNF655Q8N720 491 aaPredicted RBP15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 PDLIM5Q96HC4 596 aaKnown RBP15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 C16orf45Q96MC5 204 aaPredicted RBP15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 MCMBPQ9BTE3 642 aa15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 LRRC1Q9BTT6 524 aa15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 NLNQ9BYT8 704 aa15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 SAYSD1Q9NPB0 183 aa15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 SMYD2Q9NRG4 433 aa15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 CORO1CQ9ULV4 474 aaPredicted RBP15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 PDE10AQ9Y233 779 aa15.49■□□□□ 0.07
PDLIM5-216ENST00000511767 TLN1Q9Y490 2541 aaKnown RBP15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 SLC16A5O15375 505 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 FAM87AP0C7U9 286 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 FDXRP22570 491 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 CCR10P46092 362 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 RGS4P49798 205 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 CAV1Q03135 178 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 PTCHD3Q3KNS1 767 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 LRRC8EQ6NSJ5 796 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 TMEM207Q6UWW9 146 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 ZDHHC24Q6UX98 284 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 C3orf62Q6ZUJ4 267 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 STRA8Q7Z7C7 330 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 ZC3HC1Q86WB0 502 aaKnown RBP15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 SYTL1Q8IYJ3 562 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 MCOLN3Q8TDD5 553 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 CCDC138Q96M89 665 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 GBP5Q96PP8 586 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 OLFM1Q99784 485 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 DPH2Q9BQC3 489 aaPredicted RBP15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 ARHGAP9Q9BRR9 750 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 DPH7Q9BTV6 452 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 ACAT2Q9BWD1 397 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 ACTL8Q9H568 366 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 PARVBQ9HBI1 364 aa15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 GEMIN8Q9NWZ8 242 aaKnown RBP15.48■□□□□ 0.07
PDLIM5-216ENST00000511767 LOC105369274A0A096LPK9 316 aa15.47■□□□□ 0.07
PDLIM5-216ENST00000511767 IGKV1-8A0A0C4DH67 115 aa15.47■□□□□ 0.07
PDLIM5-216ENST00000511767 LOC102723532A0A0G2JNH3 316 aa15.47■□□□□ 0.07
PDLIM5-216ENST00000511767 OR2A25A4D2G3 310 aa15.47■□□□□ 0.07
PDLIM5-216ENST00000511767 CXorf49A8MYA2 514 aaPredicted RBP15.47■□□□□ 0.07
PDLIM5-216ENST00000511767 ZSCAN9O15535 394 aaPredicted RBP15.47■□□□□ 0.07
PDLIM5-216ENST00000511767 PIAS1O75925 651 aa15.47■□□□□ 0.07
PDLIM5-216ENST00000511767 ONECUT2O95948 504 aa15.47■□□□□ 0.07
PDLIM5-216ENST00000511767 TUBB4AP04350 444 aa15.47■□□□□ 0.07
PDLIM5-216ENST00000511767 C8GP07360 202 aa15.47■□□□□ 0.07
PDLIM5-216ENST00000511767 AGXTP21549 392 aa15.47■□□□□ 0.07
PDLIM5-216ENST00000511767 CMPK1P30085 196 aa15.47■□□□□ 0.07
PDLIM5-216ENST00000511767 IL2P60568 153 aa15.47■□□□□ 0.07
PDLIM5-216ENST00000511767 RPS18P62269 152 aaKnown RBP15.47■□□□□ 0.07
PDLIM5-216ENST00000511767 SLC7A5Q01650 507 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms