RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 LRRC56Q8IYG6 542 aaPredicted RBP20.69■□□□□ 0.9
UBE2D3-216ENST00000503742 TMEM102Q8N9M5 508 aaPredicted RBP20.69■□□□□ 0.9
UBE2D3-216ENST00000503742 CSGALNACT1Q8TDX6 532 aa20.69■□□□□ 0.9
UBE2D3-216ENST00000503742 TMEM74Q96NL1 305 aa20.69■□□□□ 0.9
UBE2D3-216ENST00000503742 CGREF1Q99674 301 aa20.69■□□□□ 0.9
UBE2D3-216ENST00000503742 GABRG3Q99928 467 aa20.69■□□□□ 0.9
UBE2D3-216ENST00000503742 TEX101Q9BY14 249 aa20.69■□□□□ 0.9
UBE2D3-216ENST00000503742 MUC13Q9H3R2 512 aa20.69■□□□□ 0.9
UBE2D3-216ENST00000503742 ZFR2Q9UPR6 939 aaKnown RBP20.69■□□□□ 0.9
UBE2D3-216ENST00000503742 ATG2BQ96BY7 2078 aa20.69■□□□□ 0.9
UBE2D3-216ENST00000503742 UNC80Q8N2C7 3258 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 CLGNO14967 610 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 RPA4Q13156 261 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 FXNQ16595 210 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 SPANXN4Q5MJ08 99 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 TICAM1Q8IUC6 712 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 FAM9CQ8IZT9 166 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 GTF2H4Q92759 462 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 SGPP1Q9BX95 441 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 MBNL1Q9NR56 388 aaKnown RBP20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 SPATA6Q9NWH7 488 aaPredicted RBP20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 EGFL7Q9UHF1 273 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 PRKAB1Q9Y478 270 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 DOCK9Q9BZ29 2069 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 PGRP06401 933 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 MAPK1P28482 360 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 NTSR1P30989 418 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 TBPL1P62380 186 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 FGL2Q14314 439 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 TMEM196Q5HYL7 178 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 ANO7Q6IWH7 933 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 CAPN13Q6MZZ7 669 aaPredicted RBP20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 DOK6Q6PKX4 331 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 UNC5DQ6UXZ4 953 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 SLCO4C1Q6ZQN7 724 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 LRRTM4Q86VH4 590 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 AMZ2Q86W34 360 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 RNF175Q8N4F7 328 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 OXR1Q8N573 874 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 GOLM1Q8NBJ4 401 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 UHRF1Q96T88 793 aaPredicted RBP20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 TRIM15Q9C019 465 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 MKRN2Q9H000 416 aaKnown RBP20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 LMCD1Q9NZU5 365 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 SLC23A2Q9UGH3 650 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 KCNE2Q9Y6J6 123 aa20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 DNMT3AQ9Y6K1 912 aaPredicted RBP20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 SPTBN5Q9NRC6 3674 aaKnown RBP20.68■□□□□ 0.9
UBE2D3-216ENST00000503742 SDC1P18827 310 aa20.67■□□□□ 0.9
UBE2D3-216ENST00000503742 TRIM23P36406 574 aa20.67■□□□□ 0.9
UBE2D3-216ENST00000503742 GRIA3P42263 894 aa20.67■□□□□ 0.9
UBE2D3-216ENST00000503742 EP400NLQ6ZTU2 488 aa20.67■□□□□ 0.9
UBE2D3-216ENST00000503742 PDZD3Q86UT5 571 aa20.67■□□□□ 0.9
UBE2D3-216ENST00000503742 TP53I13Q8NBR0 393 aaPredicted RBP20.67■□□□□ 0.9
UBE2D3-216ENST00000503742 CLHC1Q8NHS4 586 aa20.67■□□□□ 0.9
UBE2D3-216ENST00000503742 NEIL2Q969S2 332 aa20.67■□□□□ 0.9
UBE2D3-216ENST00000503742 PPM1MQ96MI6 270 aa20.67■□□□□ 0.9
UBE2D3-216ENST00000503742 ITM2CQ9NQX7 267 aa20.67■□□□□ 0.9
UBE2D3-216ENST00000503742 ARPC2O15144 300 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 KCNH1O95259 989 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 HSD3B1P14060 373 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 NPPBP16860 134 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 TACR1P25103 407 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 HSD3B2P26439 372 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 HTR1EP28566 365 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 CTHP32929 405 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 AQP4P55087 323 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 IRF4Q15306 451 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 SYTL1Q8IYJ3 562 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 TDHQ8IZJ6 230 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 ADCY4Q8NFM4 1077 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 SPDYE1Q8NFV5 336 aaPredicted RBP20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 WDR34Q96EX3 536 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 APOLD1Q96LR9 279 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 HHIPQ96QV1 700 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 KCTD14Q9BQ13 255 aaPredicted RBP20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 TAP2Q03519 686 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 INPP5AQ14642 412 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 MAPKAPK3Q16644 382 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 GRAMD1BQ3KR37 738 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 NOXRED1Q6NXP6 359 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 RIMKLAQ8IXN7 391 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 OR8J3Q8NGG0 315 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 C1QTNF2Q9BXJ5 285 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 BRF2Q9HAW0 419 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 SGK2Q9HBY8 427 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 ARMC1Q9NVT9 282 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 FBXL12Q9NXK8 326 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 VAPAQ9P0L0 249 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 VPS29Q9UBQ0 182 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 DTNAQ9Y4J8 743 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 PCDHGA11Q9Y5H2 935 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 SNX13Q9Y5W8 968 aa20.66■□□□□ 0.9
UBE2D3-216ENST00000503742 ZNF839A8K0R7 811 aa20.65■□□□□ 0.9
UBE2D3-216ENST00000503742 GPR89AB7ZAQ6 455 aa20.65■□□□□ 0.9
UBE2D3-216ENST00000503742 PLRG1O43660 514 aaKnown RBP20.65■□□□□ 0.9
UBE2D3-216ENST00000503742 ADAM23O75077 832 aa20.65■□□□□ 0.9
UBE2D3-216ENST00000503742 GPR89BP0CG08 455 aa20.65■□□□□ 0.9
UBE2D3-216ENST00000503742 BMP8BP34820 402 aa20.65■□□□□ 0.9
UBE2D3-216ENST00000503742 PHC1P78364 1004 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms