RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 VWA5B1Q5TIE3 1220 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 SHEQ5VZ18 495 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 HIST2H2BCQ6DN03 193 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 HIST2H2BDQ6DRA6 164 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 TAPT1Q6NXT6 567 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 TRIM40Q6P9F5 258 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ARSKQ6UWY0 536 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 C1orf229Q6ZS94 237 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 PPP1R42Q7Z4L9 355 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 AMZ2Q86W34 360 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PROSER1Q86XN7 944 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 CCNJLQ8IV13 435 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ARL10Q8N8L6 244 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 BANPQ8N9N5 519 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 FAM71DQ8N9W8 422 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 GLIS1Q8NBF1 620 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 FAM46DQ8NEK8 389 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 GPR150Q8NGU9 434 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 OR51E1Q8TCB6 317 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 DTX3LQ8TDB6 740 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ANKS1AQ92625 1134 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 FAM81BQ96LP2 452 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 APOLD1Q96LR9 279 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 GCNAQ96QF7 691 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 MBOAT4Q96T53 435 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 OMDQ99983 421 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 TRIM9Q9C026 710 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 WNT10AQ9GZT5 417 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 CHRNA10Q9GZZ6 450 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 SMARCAD1Q9H4L7 1026 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 RANBP3Q9H6Z4 567 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 TMEM185BQ9H7F4 350 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 SLC2A8Q9NY64 477 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 SLC24A2Q9UI40 661 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 KCTD3Q9Y597 815 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PCDHGA5Q9Y5G8 931 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ALPK3Q96L96 1907 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 GLYATL1P3A0A0U1RQE8 302 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 LOC100653049A0A140TA62 436 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 GOLGA6BA6NDN3 693 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PRR19A6NJB7 356 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ZNF729A6NN14 1252 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 FAM227AF5H4B4 570 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 F6UB75 175 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 GFYI3L273 518 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 OVOL1O14753 267 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 TNFSF11O14788 317 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 INPPL1O15357 1258 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 KRT34O76011 436 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 MYO1DO94832 1006 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 TMCC1O94876 653 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ABHD16AO95870 558 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 CST3P01034 146 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 CATP04040 527 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 F13BP05160 661 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 HSP90AB1P08238 724 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 GSTA1P08263 222 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 GFAPP14136 432 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 FPR1P21462 350 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 TGFBR1P36897 503 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 CCR2P41597 374 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 RORCP51449 518 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 CACNB2Q08289 660 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 LAMB3Q13751 1172 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 GINS1Q14691 196 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 KRT72Q14CN4 511 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 IL17AQ16552 155 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 SKOR2Q2VWA4 1001 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 PARP15Q460N3 678 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 SLC44A4Q53GD3 710 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ZMAT1Q5H9K5 638 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ERMARDQ5T6L9 678 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ZNF324BQ6AW86 544 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 C11orf88Q6PI97 169 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 MAATS1Q7Z4T9 603 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 LDB1Q86U70 411 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 CAND1Q86VP6 1230 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 APLFQ8IW19 511 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 SLITRK4Q8IW52 837 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 FTSJ3Q8IY81 847 aaKnown RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 CCDC105Q8IYK2 499 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 FAM9CQ8IZT9 166 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 BEST3Q8N1M1 668 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 SLC35F6Q8N357 371 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 SYNPOQ8N3V7 929 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ALLCQ8N6M5 410 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 STPG3Q8N7X2 389 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 C2CD4AQ8NCU7 369 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 RCBTB1Q8NDN9 531 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 OR4S1Q8NGB4 309 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 OR4B1Q8NGF8 309 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 PLPPR1Q8TBJ4 325 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 CASP10Q92851 521 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 OTULINQ96BN8 352 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 COG8Q96MW5 612 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ZNF578Q96N58 590 aaPredicted RBP1.39□□□□□ -2.19
XRN1-214ENST00000498077 PANX2Q96RD6 677 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 ORAI2Q96SN7 254 aa1.39□□□□□ -2.19
XRN1-214ENST00000498077 NPAS1Q99742 590 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms