RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 EFTUD2Q15029 972 aaKnown RBP eCLIP5.84□□□□□ -1.47
BRCA1-224ENST00000497488 CTU2Q2VPK5 515 aaKnown RBP5.84□□□□□ -1.47
BRCA1-224ENST00000497488 BEAN1Q3B7T3 259 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 ZDHHC20Q5W0Z9 365 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 GGNBP1Q5YKI7 109 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 MFSD12Q6NUT3 480 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 METTL2BQ6P1Q9 378 aaKnown RBP5.84□□□□□ -1.47
BRCA1-224ENST00000497488 AAGABQ6PD74 315 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 BTNL8Q6UX41 500 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 ANKRD46Q86W74 232 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 UEVLDQ8IX04 471 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 ABI1Q8IZP0 508 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 APCDD1Q8J025 514 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 CENPLQ8N0S6 344 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-224ENST00000497488 FUKQ8N0W3 1084 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 ARL14Q8N4G2 192 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 C8orf58Q8NAV2 365 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 DRAXINQ8NBI3 349 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-224ENST00000497488 AKR7LQ8NHP1 331 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 METTL2AQ96IZ6 378 aaKnown RBP5.84□□□□□ -1.47
BRCA1-224ENST00000497488 RPGRIP1Q96KN7 1286 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 GNRHR2Q96P88 292 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 RASL10BQ96S79 203 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 PCYT2Q99447 389 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 CAPS2Q9BXY5 557 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 GPR61Q9BZJ8 451 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 CUEDC2Q9H467 287 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 ZNF768Q9H5H4 540 aaKnown RBP5.84□□□□□ -1.47
BRCA1-224ENST00000497488 TMEM231Q9H6L2 316 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 PPP1R3EQ9H7J1 279 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 ROPN1Q9HAT0 212 aaPredicted RBP5.84□□□□□ -1.47
BRCA1-224ENST00000497488 FANCEQ9HB96 536 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 CDH20Q9HBT6 801 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 NDUFA13Q9P0J0 144 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 SLC9A2Q9UBY0 812 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 CHRNA9Q9UGM1 479 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 UBR1Q8IWV7 1749 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 E9PCH4 1651 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 TET3O43151 1660 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 GCC2Q8IWJ2 1684 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 PIK3C2BO00750 1634 aa5.84□□□□□ -1.47
BRCA1-224ENST00000497488 HFM1A2PYH4 1435 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 NUP155O75694 1391 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 A0A087X0K7 114 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 TRBV5-7A0A0A0MS05 114 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 ZNF503-AS2A6NEH8 195 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 NCF1BA6NI72 391 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-224ENST00000497488 NCF1CA8MVU1 366 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-224ENST00000497488 J3QR06 171 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 K7EQM0 130 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 SLC28A1O00337 649 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 ANKRD28O15084 1053 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 ATP6V1G1O75348 118 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 OR6A2O95222 327 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 WNT11O96014 354 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 PAHP00439 452 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 LCKP06239 509 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 FGF4P08620 206 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 MYZAPP0CAP1 466 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 CSF2RAP15509 400 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 MAOAP21397 527 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 ELAVL4P26378 380 aaKnown RBP5.83□□□□□ -1.48
BRCA1-224ENST00000497488 SSR1P43307 286 aaKnown RBP5.83□□□□□ -1.48
BRCA1-224ENST00000497488 MAPK12P53778 367 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 HUNKP57058 714 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 GSDMDP57764 484 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 HHEXQ03014 270 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 PRKAA1Q13131 559 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 PDK4Q16654 411 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 PFKFB3Q16875 520 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-224ENST00000497488 LACTB2Q53H82 288 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-224ENST00000497488 NCAPH2Q6IBW4 605 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 LCN10Q6JVE6 187 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 ZNF517Q6ZMY9 492 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-224ENST00000497488 TMEM26Q6ZUK4 368 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 MEX3DQ86XN8 651 aaKnown RBP5.83□□□□□ -1.48
BRCA1-224ENST00000497488 TTC5Q8N0Z6 440 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 NIPA2Q8N8Q9 360 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 GBP7Q8N8V2 638 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-224ENST00000497488 TERB1Q8NA31 727 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 CMASQ8NFW8 434 aaPredicted RBP5.83□□□□□ -1.48
BRCA1-224ENST00000497488 TRIM58Q8NG06 486 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 KAT2BQ92831 832 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 APBB2Q92870 758 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 OTULINQ96BN8 352 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 PHF21BQ96EK2 531 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 ZNF607Q96SK3 696 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 FICDQ9BVA6 458 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 FNDC11Q9BVV2 318 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 ACTR8Q9H981 624 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 VAT1LQ9HCJ6 419 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 FAM114A2Q9NRY5 505 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 CYSLTR2Q9NS75 346 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 RAB20Q9NX57 234 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 ATXN10Q9UBB4 475 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 RHCGQ9UBD6 479 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 GRID1Q9ULK0 1009 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 B3GALT5Q9Y2C3 310 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 ZNF510Q9Y2H8 683 aa5.83□□□□□ -1.48
BRCA1-224ENST00000497488 NME7Q9Y5B8 376 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms