RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 NLRC5Q86WI3 1866 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 ARHGEF37A1IGU5 675 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 FAM90A10PA6NDY2 464 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 TRABD2BA6NFA1 517 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 TMEM202A6NGA9 273 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 CGB1A6NKQ9 187 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 FOXO6A8MYZ6 492 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 POC1B-GALNT4F8VUJ3 575 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 TRIM77I1YAP6 450 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 K7EPI3 171 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 CLDN4O14493 209 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 CDX4O14627 284 aaPredicted RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 NDUFS4O43181 175 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 MED24O75448 989 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 AKAP3O75969 853 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 RSL1D1O76021 490 aaKnown RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 NDUFB4O95168 129 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 GUCA1CO95843 209 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 ITGB3P05106 788 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 HEXBP07686 556 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 VIMP08670 466 aaKnown RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 OR52Z1P0C646 297 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 C8orf89P0DMQ9 161 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 NR2F6P10588 404 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 VPREB1P12018 145 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 PDGFRAP16234 1089 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 ENGP17813 658 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 GNAZP19086 355 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 MYF6P23409 242 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 ACP1P24666 158 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 HOXD9P28356 352 aaPredicted RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 TKTP29401 623 aaKnown RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 CCND2P30279 289 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 HSPA4P34932 840 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 SOAT1P35610 550 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 SLC16A2P36021 539 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 DCTP40126 519 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 MPLP40238 635 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 IL15P40933 162 aaPredicted RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 EIF2S3P41091 472 aaKnown RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 IER3P46695 156 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 RPS9P46781 194 aaKnown RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 RAP1GAPP47736 663 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 VPS41P49754 854 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 SELENOPP49908 381 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 METAP2P50579 478 aaKnown RBP eCLIP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 COPB1P53618 953 aaKnown RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 CACNA2D1P54289 1103 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 CASP9P55211 416 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 CDH13P55290 713 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 BACE1P56817 501 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 HOXA4Q00056 320 aaPredicted RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 CDK3Q00526 305 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 BEX3Q00994 111 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 EGR4Q05215 589 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 ARHGAP1Q07960 439 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 ST3GAL1Q11201 340 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 TCP10Q12799 353 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 GRIK2Q13002 908 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 SRSF5Q13243 272 aaKnown RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 LPIN1Q14693 890 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 SGCBQ16585 318 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 SMN1Q16637 294 aaKnown RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 DECR1Q16698 335 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 SYT16Q17RD7 645 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 PNLIPRP3Q17RR3 467 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 C2orf68Q2NKX9 166 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 LETM2Q2VYF4 491 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 CCDC152Q4G0S7 254 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 PPP6R3Q5H9R7 873 aaPredicted RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 MDH1BQ5I0G3 518 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 TTC39AQ5SRH9 613 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 FRG2Q64ET8 278 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 TMEM211Q6ICI0 200 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 TCEAL6Q6IPX3 200 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 CES5AQ6NT32 575 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 METTL2BQ6P1Q9 378 aaKnown RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 LINGO4Q6UY18 593 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 PPP1R21Q6ZMI0 780 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 Q6ZNX1 250 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 C1orf186Q6ZWK4 172 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 MIER3Q7Z3K6 550 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 PIP4P1Q86T03 277 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 TMEM110Q86TL2 294 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 ANKRD13BQ86YJ7 626 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 TDRPQ86YL5 185 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 MFN1Q8IWA4 741 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 PEX5LQ8IYB4 626 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 PM20D2Q8IYS1 436 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 ELMOD2Q8IZ81 293 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 CLYBLQ8N0X4 340 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 SLC44A3Q8N4M1 653 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZBTB2Q8N680 514 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 ARL14EPQ8N8R7 260 aaPredicted RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 OR14L1PQ8NHC6 308 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 KIAA1524Q8TCG1 905 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 SLC25A43Q8WUT9 341 aaPredicted RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 KAT2AQ92830 837 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 TCEAL3Q969E4 200 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 TOP1MTQ969P6 601 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms