RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 KLHL3Q9UH77 587 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 TAC3Q9UHF0 121 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 LNPEPQ9UIQ6 1025 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 POMT2Q9UKY4 750 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 SLC22A14Q9Y267 594 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 KLHL20Q9Y2M5 609 aa13.03□□□□□ -0.32
PTPN7-218ENST00000496197 MN1Q10571 1320 aaPredicted RBP13.03□□□□□ -0.32
PTPN7-218ENST00000496197 MDC1Q14676 2089 aaKnown RBP13.02□□□□□ -0.32
PTPN7-218ENST00000496197 IGKV1-8A0A0C4DH67 115 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 D6RAR5 112 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 ATP8B1O43520 1251 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 PRAMEF4O60810 478 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 WDR47O94967 919 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 KCNK5O95279 499 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 C9P02748 559 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 CEACAM1P13688 526 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 KCNA4P22459 653 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 PRDX3P30048 256 aaKnown RBP13.02□□□□□ -0.33
PTPN7-218ENST00000496197 HPDP32754 393 aaPredicted RBP13.02□□□□□ -0.33
PTPN7-218ENST00000496197 PPM1FP49593 454 aaPredicted RBP13.02□□□□□ -0.33
PTPN7-218ENST00000496197 HNMTP50135 292 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 ALDH18A1P54886 795 aaKnown RBP13.02□□□□□ -0.33
PTPN7-218ENST00000496197 SIM1P81133 766 aaPredicted RBP13.02□□□□□ -0.33
PTPN7-218ENST00000496197 SQSTM1Q13501 440 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 CDKL4Q5MAI5 379 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 PRAMEF9Q5VWM5 478 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 KIAA1614Q5VZ46 1190 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 CES4AQ5XG92 561 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 SPESP1Q6UW49 350 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 KLHDC8AQ8IYD2 350 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 ANKRD42Q8N9B4 389 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 SMPDL3AQ92484 453 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 PKNOX2Q96KN3 472 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 NSUN5Q96P11 429 aaKnown RBP13.02□□□□□ -0.33
PTPN7-218ENST00000496197 MAP3K3Q99759 626 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 MIPEPQ99797 713 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 CD244Q9BZW8 370 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 RAB33BQ9H082 229 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 IQCGQ9H095 443 aaKnown RBP13.02□□□□□ -0.33
PTPN7-218ENST00000496197 SLC6A20Q9NP91 592 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 CCDC177Q9NQR7 707 aaPredicted RBP13.02□□□□□ -0.33
PTPN7-218ENST00000496197 CUEDC1Q9NWM3 386 aaPredicted RBP13.02□□□□□ -0.33
PTPN7-218ENST00000496197 EPHA6Q9UF33 1036 aa13.02□□□□□ -0.33
PTPN7-218ENST00000496197 IGHV5-51A0A0C4DH38 117 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 IGHV5-10-1A0A0J9YXX1 117 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 PABPN1LA6NDY0 278 aaKnown RBP13.01□□□□□ -0.33
PTPN7-218ENST00000496197 C2orf74A8MZ97 194 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 HMGB1P1B2RPK0 211 aaPredicted RBP13.01□□□□□ -0.33
PTPN7-218ENST00000496197 AGRPO00253 132 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 E2F3O00716 465 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 KDM1AO60341 852 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 CCNT2O60583 730 aaKnown RBP13.01□□□□□ -0.33
PTPN7-218ENST00000496197 SMIM24O75264 130 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 CPNE6O95741 557 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 S100BP04271 92 aaPredicted RBP13.01□□□□□ -0.33
PTPN7-218ENST00000496197 DHRS4L1P0CG22 281 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 NPPBP16860 134 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 ATP5F1P24539 256 aaPredicted RBP13.01□□□□□ -0.33
PTPN7-218ENST00000496197 EEF1DP29692 281 aaKnown RBP13.01□□□□□ -0.33
PTPN7-218ENST00000496197 OAS2P29728 719 aaKnown RBP13.01□□□□□ -0.33
PTPN7-218ENST00000496197 ALDH3A1P30838 453 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 WDR4P57081 412 aaKnown RBP13.01□□□□□ -0.33
PTPN7-218ENST00000496197 NFKB2Q00653 900 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 KIR2DS3Q14952 304 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 SNAP47Q5SQN1 464 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 PRAMEF13Q5VWM6 474 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 WDR74Q6RFH5 385 aaPredicted RBP13.01□□□□□ -0.33
PTPN7-218ENST00000496197 THOC6Q86W42 341 aaKnown RBP13.01□□□□□ -0.33
PTPN7-218ENST00000496197 C10orf107Q8IVU9 208 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 SLITRK4Q8IW52 837 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 RAB42Q8N4Z0 105 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 GOLGA6L1Q8N7Z2 621 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 CCDC63Q8NA47 563 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 OR2L3Q8NG85 312 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 MDM1Q8TC05 714 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 ATL1Q8WXF7 558 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 PRR11Q96HE9 360 aaPredicted RBP13.01□□□□□ -0.33
PTPN7-218ENST00000496197 GFM1Q96RP9 751 aaKnown RBP13.01□□□□□ -0.33
PTPN7-218ENST00000496197 SELENOSQ9BQE4 189 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 ACBD3Q9H3P7 528 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 SYNPO2LQ9H987 977 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 ZBTB26Q9HCK0 441 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 DLL3Q9NYJ7 618 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 PCDHGA1Q9Y5H4 931 aa13.01□□□□□ -0.33
PTPN7-218ENST00000496197 PIEZO1Q92508 2521 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 A0A1B0GTL3 188 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 A8MU76 341 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 STX16-NPEPL1H3BU86 382 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 PPP6CO00743 305 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 STX16O14662 325 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 STK16O75716 305 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 IPO13O94829 963 aaKnown RBP13□□□□□ -0.33
PTPN7-218ENST00000496197 RPS17P08708 135 aaKnown RBP13□□□□□ -0.33
PTPN7-218ENST00000496197 THRAP10827 490 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 MYL2P10916 166 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 CPA3P15088 417 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 ST6GAL1P15907 406 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 TSPAN8P19075 237 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 HSD17B2P37059 387 aa13□□□□□ -0.33
PTPN7-218ENST00000496197 CCR10P46092 362 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms