RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	SPNS2	Q8IVW8	549 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	LRRC56	Q8IYG6	542 aa	Predicted RBP	13.1	□□□□□ -0.31
APTX-231	ENST00000494973	TBC1D19	Q8N5T2	526 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	TEX9	Q8N6V9	391 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	OR4E2	Q8NGC2	313 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	ATP6V1E2	Q96A05	226 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	IL17F	Q96PD4	163 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	ZNF382	Q96SR6	550 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	GATA5	Q9BWX5	397 aa	Predicted RBP	13.1	□□□□□ -0.31
APTX-231	ENST00000494973	PITHD1	Q9GZP4	211 aa	Predicted RBP	13.1	□□□□□ -0.31
APTX-231	ENST00000494973	RAB33B	Q9H082	229 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	ZMYND15	Q9H091	742 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	PFDN4	Q9NQP4	134 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	PLAGL1	Q9UM63	463 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	RNF215	Q9Y6U7	377 aa		13.1	□□□□□ -0.31
APTX-231	ENST00000494973	CDX4	O14627	284 aa	Predicted RBP	13.09	□□□□□ -0.31
APTX-231	ENST00000494973	PPM1D	O15297	605 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	POLR3G	O15318	223 aa	Predicted RBP	13.09	□□□□□ -0.31
APTX-231	ENST00000494973	MAP3K7	O43318	606 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	CRCP	O75575	148 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	SIX3	O95343	332 aa	Predicted RBP	13.09	□□□□□ -0.31
APTX-231	ENST00000494973	LDOC1	O95751	146 aa	Predicted RBP	13.09	□□□□□ -0.31
APTX-231	ENST00000494973	ENO1	P06733	434 aa	Known RBP	13.09	□□□□□ -0.31
APTX-231	ENST00000494973	EBLN1	P0CF75	366 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	CKMT2	P17540	419 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	CXCR2	P25025	360 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	ARL1	P40616	181 aa	Predicted RBP	13.09	□□□□□ -0.31
APTX-231	ENST00000494973	PPM1F	P49593	454 aa	Predicted RBP	13.09	□□□□□ -0.31
APTX-231	ENST00000494973	AGTR2	P50052	363 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	CCNG1	P51959	295 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	LIMK1	P53667	647 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	ABCE1	P61221	599 aa	Known RBP	13.09	□□□□□ -0.31
APTX-231	ENST00000494973	LAPTM5	Q13571	262 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	TBCC	Q15814	346 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	RBBP7	Q16576	425 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	SLC5A12	Q1EHB4	618 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	UNC50	Q53HI1	259 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	GOLGA7	Q7Z5G4	137 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	PLXDC1	Q8IUK5	500 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	NAXD	Q8IW45	347 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	OR2I1P	Q8NGU4	316 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	OR6Y1	Q8NGX8	325 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	RHBDD1	Q8TEB9	315 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	SLC5A11	Q8WWX8	675 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	ZNF75CP	Q92670	426 aa	Predicted RBP	13.09	□□□□□ -0.31
APTX-231	ENST00000494973	UBE2E3	Q969T4	207 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	GRAMD1A	Q96CP6	724 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	REPS1	Q96D71	796 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	ZDHHC12	Q96GR4	267 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	FAR2	Q96K12	515 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	CNDP2	Q96KP4	475 aa	Known RBP	13.09	□□□□□ -0.31
APTX-231	ENST00000494973	C7orf26	Q96N11	449 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	EFCAB11	Q9BUY7	163 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	NTMT1	Q9BV86	223 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	TWSG1	Q9GZX9	223 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	NSRP1	Q9H0G5	558 aa	Known RBP	13.09	□□□□□ -0.31
APTX-231	ENST00000494973	GSTO2	Q9H4Y5	243 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	IPPK	Q9H8X2	491 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	PELI2	Q9HAT8	420 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	HRASLS2	Q9NWW9	162 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	EPHA6	Q9UF33	1036 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	TAC3	Q9UHF0	121 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	SLC22A14	Q9Y267	594 aa		13.09	□□□□□ -0.31
APTX-231	ENST00000494973	GOLGA4	Q13439	2230 aa	Known RBP	13.09	□□□□□ -0.31
APTX-231	ENST00000494973	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.08	□□□□□ -0.32
APTX-231	ENST00000494973	GSAP	A4D1B5	854 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	OR6C74	A6NCV1	312 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	SRRM3	A6NNA2	597 aa	Predicted RBP	13.08	□□□□□ -0.32
APTX-231	ENST00000494973	ISM1	B1AKI9	464 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	SLCO1B7	G3V0H7	640 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	CHEK2	O96017	543 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	CDK4	P11802	303 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	GSTM2	P28161	218 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	GRK3	P35626	688 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	HNF4A	P41235	474 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	SLC1A6	P48664	564 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	GUCY1A3	Q02108	690 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	IRF8	Q02556	426 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	NHLH1	Q02575	133 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	PRDX1	Q06830	199 aa	Known RBP	13.08	□□□□□ -0.32
APTX-231	ENST00000494973	BST1	Q10588	318 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	ILK	Q13418	452 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	HIST2H2AC	Q16777	129 aa	Predicted RBP	13.08	□□□□□ -0.32
APTX-231	ENST00000494973	GGTA1P	Q4G0N0	100 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	LIPJ	Q5W064	366 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	ICE2	Q659A1	982 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	HIST2H2AA3	Q6FI13	130 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	GPRIN3	Q6ZVF9	776 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	CRLF3	Q8IUI8	442 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	ADGRF3	Q8IZF5	1079 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	LMNTD1	Q8N9Z9	388 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	LINC01555	Q8NAE3	123 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	CCDC74A	Q96AQ1	378 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	PYCR2	Q96C36	320 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	SLC29A3	Q9BZD2	475 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	ILKAP	Q9H0C8	392 aa	Predicted RBP	13.08	□□□□□ -0.32
APTX-231	ENST00000494973	XKR8	Q9H6D3	395 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	NOL11	Q9H8H0	719 aa	Known RBP	13.08	□□□□□ -0.32
APTX-231	ENST00000494973	ACTR8	Q9H981	624 aa		13.08	□□□□□ -0.32
APTX-231	ENST00000494973	MRPS30	Q9NP92	439 aa	Known RBP	13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms