RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.25■■□□□ 1.15
COL27A1-208ENST00000494780 EIF2B3Q9NR50 452 aaKnown RBP22.25■■□□□ 1.15
COL27A1-208ENST00000494780 AGPAT4Q9NRZ5 378 aa22.25■■□□□ 1.15
COL27A1-208ENST00000494780 TREX1Q9NSU2 369 aa22.25■■□□□ 1.15
COL27A1-208ENST00000494780 KLK4Q9Y5K2 254 aa22.25■■□□□ 1.15
COL27A1-208ENST00000494780 HS3ST3B1Q9Y662 390 aa22.25■■□□□ 1.15
COL27A1-208ENST00000494780 AGAP7PQ5VUJ5 663 aa22.24■■□□□ 1.15
COL27A1-208ENST00000494780 KIRREL2Q6UWL6 708 aa22.24■■□□□ 1.15
COL27A1-208ENST00000494780 IGFL2Q6UWQ7 119 aa22.24■■□□□ 1.15
COL27A1-208ENST00000494780 OTOAQ7RTW8 1153 aa22.24■■□□□ 1.15
COL27A1-208ENST00000494780 C5orf34Q96MH7 638 aa22.24■■□□□ 1.15
COL27A1-208ENST00000494780 AGAP4Q96P64 663 aa22.24■■□□□ 1.15
COL27A1-208ENST00000494780 IL22Q9GZX6 179 aa22.24■■□□□ 1.15
COL27A1-208ENST00000494780 SOX17Q9H6I2 414 aaPredicted RBP22.24■■□□□ 1.15
COL27A1-208ENST00000494780 SEMA3GQ9NS98 782 aa22.24■■□□□ 1.15
COL27A1-208ENST00000494780 TTC7AQ9ULT0 858 aaPredicted RBP22.24■■□□□ 1.15
COL27A1-208ENST00000494780 NTNG1Q9Y2I2 539 aa22.24■■□□□ 1.15
COL27A1-208ENST00000494780 FAM169AQ9Y6X4 670 aa22.24■■□□□ 1.15
COL27A1-208ENST00000494780 VSTM2BA6NLU5 285 aa22.23■■□□□ 1.15
COL27A1-208ENST00000494780 AP3B1O00203 1094 aa22.23■■□□□ 1.15
COL27A1-208ENST00000494780 CTSVO60911 334 aa22.23■■□□□ 1.15
COL27A1-208ENST00000494780 ALOX12BO75342 701 aa22.23■■□□□ 1.15
COL27A1-208ENST00000494780 NDUFS3O75489 264 aa22.23■■□□□ 1.15
COL27A1-208ENST00000494780 RPL22P35268 128 aaKnown RBP22.23■■□□□ 1.15
COL27A1-208ENST00000494780 CCNFP41002 786 aa22.23■■□□□ 1.15
COL27A1-208ENST00000494780 BDKRB1P46663 353 aa22.23■■□□□ 1.15
COL27A1-208ENST00000494780 OR1D4P47884 311 aa22.23■■□□□ 1.15
COL27A1-208ENST00000494780 SESN2P58004 480 aaPredicted RBP22.23■■□□□ 1.15
COL27A1-208ENST00000494780 VSX2P58304 361 aaPredicted RBP22.23■■□□□ 1.15
COL27A1-208ENST00000494780 RBBP7Q16576 425 aa22.23■■□□□ 1.15
COL27A1-208ENST00000494780 TUBB8Q3ZCM7 444 aa22.23■■□□□ 1.15
COL27A1-208ENST00000494780 WASHC2DQ5SRD0 308 aa22.23■■□□□ 1.15
COL27A1-208ENST00000494780 SKA2Q8WVK7 121 aaPredicted RBP22.23■■□□□ 1.15
COL27A1-208ENST00000494780 FOPNLQ96NB1 174 aa22.23■■□□□ 1.15
COL27A1-208ENST00000494780 CTSFQ9UBX1 484 aa22.23■■□□□ 1.15
COL27A1-208ENST00000494780 NFS1Q9Y697 457 aa22.23■■□□□ 1.15
COL27A1-208ENST00000494780 ZSCAN5DPP0CG00 497 aa22.22■■□□□ 1.15
COL27A1-208ENST00000494780 NPY2RP49146 381 aa22.22■■□□□ 1.15
COL27A1-208ENST00000494780 HIF1AQ16665 826 aa22.22■■□□□ 1.15
COL27A1-208ENST00000494780 CCSMST1Q4G0I0 132 aa22.22■■□□□ 1.15
COL27A1-208ENST00000494780 C4orf22Q6V702 233 aa22.22■■□□□ 1.15
COL27A1-208ENST00000494780 SHISA6Q6ZSJ9 500 aa22.22■■□□□ 1.15
COL27A1-208ENST00000494780 OR2L3Q8NG85 312 aa22.22■■□□□ 1.15
COL27A1-208ENST00000494780 DNAJB14Q8TBM8 379 aa22.22■■□□□ 1.15
COL27A1-208ENST00000494780 MAGEC3Q8TD91 643 aa22.22■■□□□ 1.15
COL27A1-208ENST00000494780 MIPEPQ99797 713 aa22.22■■□□□ 1.15
COL27A1-208ENST00000494780 TSGA10Q9BZW7 698 aa22.22■■□□□ 1.15
COL27A1-208ENST00000494780 LHPPQ9H008 270 aa22.22■■□□□ 1.15
COL27A1-208ENST00000494780 BFARQ9NZS9 450 aa22.22■■□□□ 1.15
COL27A1-208ENST00000494780 SPATA7Q9P0W8 599 aa22.22■■□□□ 1.15
COL27A1-208ENST00000494780 NOVA2Q9UNW9 492 aaKnown RBP22.22■■□□□ 1.15
COL27A1-208ENST00000494780 CSAG2Q9Y5P2 127 aa22.22■■□□□ 1.15
COL27A1-208ENST00000494780 HYKKA2RU49 373 aa22.21■■□□□ 1.15
COL27A1-208ENST00000494780 CLDN1O95832 211 aa22.21■■□□□ 1.15
COL27A1-208ENST00000494780 PSMB5P28074 263 aa22.21■■□□□ 1.15
COL27A1-208ENST00000494780 NMBRP28336 390 aa22.21■■□□□ 1.15
COL27A1-208ENST00000494780 TSFMP43897 325 aaKnown RBP22.21■■□□□ 1.15
COL27A1-208ENST00000494780 CARSP49589 748 aaKnown RBP22.21■■□□□ 1.15
COL27A1-208ENST00000494780 CRADDP78560 199 aa22.21■■□□□ 1.15
COL27A1-208ENST00000494780 NAA25Q14CX7 972 aa22.21■■□□□ 1.15
COL27A1-208ENST00000494780 CCNG2Q16589 344 aa22.21■■□□□ 1.15
COL27A1-208ENST00000494780 PARP9Q8IXQ6 854 aa22.21■■□□□ 1.15
COL27A1-208ENST00000494780 METTL27Q8N6F8 245 aaPredicted RBP22.21■■□□□ 1.15
COL27A1-208ENST00000494780 ST6GALNAC3Q8NDV1 305 aa22.21■■□□□ 1.15
COL27A1-208ENST00000494780 OR11G2Q8NGC1 345 aa22.21■■□□□ 1.15
COL27A1-208ENST00000494780 EPS8L2Q9H6S3 715 aa22.21■■□□□ 1.15
COL27A1-208ENST00000494780 ZNF304Q9HCX3 659 aa22.21■■□□□ 1.15
COL27A1-208ENST00000494780 GUCA1BQ9UMX6 200 aa22.21■■□□□ 1.15
COL27A1-208ENST00000494780 DRG1Q9Y295 367 aaKnown RBP22.21■■□□□ 1.15
COL27A1-208ENST00000494780 A0A1W2PPV9 198 aa22.2■■□□□ 1.14
COL27A1-208ENST00000494780 EIF3BP55884 814 aaKnown RBP22.2■■□□□ 1.14
COL27A1-208ENST00000494780 SIX1Q15475 284 aaPredicted RBP22.2■■□□□ 1.14
COL27A1-208ENST00000494780 FRMPD2BQ6IN97 320 aa22.2■■□□□ 1.14
COL27A1-208ENST00000494780 PRMT9Q6P2P2 845 aa22.2■■□□□ 1.14
COL27A1-208ENST00000494780 DRICH1Q6PGQ1 229 aaPredicted RBP22.2■■□□□ 1.14
COL27A1-208ENST00000494780 CNSTQ6PJW8 725 aa22.2■■□□□ 1.14
COL27A1-208ENST00000494780 RNF44Q7L0R7 432 aa22.2■■□□□ 1.14
COL27A1-208ENST00000494780 OR2A1Q8NGT9 310 aa22.2■■□□□ 1.14
COL27A1-208ENST00000494780 CRB3Q9BUF7 120 aa22.2■■□□□ 1.14
COL27A1-208ENST00000494780 RUVBL2Q9Y230 463 aaKnown RBP22.2■■□□□ 1.14
COL27A1-208ENST00000494780 MAU2Q9Y6X3 613 aa22.2■■□□□ 1.14
COL27A1-208ENST00000494780 DOCK10Q96BY6 2186 aa22.2■■□□□ 1.14
COL27A1-208ENST00000494780 A0A0J9YVX5 310 aa22.19■■□□□ 1.14
COL27A1-208ENST00000494780 ATP5DP30049 168 aa22.19■■□□□ 1.14
COL27A1-208ENST00000494780 BASP1P80723 227 aaKnown RBP22.19■■□□□ 1.14
COL27A1-208ENST00000494780 OCA2Q04671 838 aa22.19■■□□□ 1.14
COL27A1-208ENST00000494780 ZNF169Q14929 603 aaPredicted RBP22.19■■□□□ 1.14
COL27A1-208ENST00000494780 RPS6KA1Q15418 735 aa22.19■■□□□ 1.14
COL27A1-208ENST00000494780 CTSL3PQ5NE16 218 aa22.19■■□□□ 1.14
COL27A1-208ENST00000494780 B3GNTL1Q67FW5 361 aaPredicted RBP22.19■■□□□ 1.14
COL27A1-208ENST00000494780 MRNIPQ6NTE8 343 aa22.19■■□□□ 1.14
COL27A1-208ENST00000494780 SDCCAG8Q86SQ7 713 aaPredicted RBP22.19■■□□□ 1.14
COL27A1-208ENST00000494780 KCNMB4Q86W47 210 aa22.19■■□□□ 1.14
COL27A1-208ENST00000494780 OTUD6BQ8N6M0 293 aa22.19■■□□□ 1.14
COL27A1-208ENST00000494780 STT3BQ8TCJ2 826 aa22.19■■□□□ 1.14
COL27A1-208ENST00000494780 MIEF2Q96C03 454 aa22.19■■□□□ 1.14
COL27A1-208ENST00000494780 THOC3Q96J01 351 aaKnown RBP22.19■■□□□ 1.14
COL27A1-208ENST00000494780 BIRC8Q96P09 236 aa22.19■■□□□ 1.14
COL27A1-208ENST00000494780 KIFC1Q9BW19 673 aa22.19■■□□□ 1.14
COL27A1-208ENST00000494780 ZNF282Q9UDV7 671 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms