RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 RAD51AP1Q96B01 352 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 SIGLEC10Q96LC7 697 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 TCF12Q99081 682 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 SLC25A23Q9BV35 468 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 NUDT9Q9BW91 350 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 ACAT2Q9BWD1 397 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 MLXIPLQ9NP71 852 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 TXLNGQ9NUQ3 528 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 LUZP4Q9P127 313 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 SAMD15Q9P1V8 674 aa8.19□□□□□ -1.1
LRCH3-219ENST00000494069 IFT80Q9P2H3 777 aaPredicted RBP8.19□□□□□ -1.1
LRCH3-219ENST00000494069 LOC105369274A0A096LPK9 316 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 LOC102723532A0A0G2JNH3 316 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 A0A0J9YVX5 310 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 CTAGE9A4FU28 777 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 H3BMM5 538 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 KPNA5O15131 536 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 KDM1AO60341 852 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 PHF2O75151 1096 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 ALOX12BO75342 701 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 CEACAM4O75871 244 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 HAUS5O94927 633 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 MLNP12872 115 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 PAMP19021 973 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 SLC1A2P43004 574 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 OR1D4P47884 311 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 CLCN7P51798 805 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 PGDP52209 483 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 ADARP55265 1226 aaKnown RBP8.18□□□□□ -1.1
LRCH3-219ENST00000494069 VSX2P58304 361 aaPredicted RBP8.18□□□□□ -1.1
LRCH3-219ENST00000494069 SARNPP82979 210 aaKnown RBP8.18□□□□□ -1.1
LRCH3-219ENST00000494069 SRSF1Q07955 248 aaKnown RBP eCLIP8.18□□□□□ -1.1
LRCH3-219ENST00000494069 THOC5Q13769 683 aaKnown RBP8.18□□□□□ -1.1
LRCH3-219ENST00000494069 CYP2A13Q16696 494 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 RNF187Q5TA31 235 aaPredicted RBP8.18□□□□□ -1.1
LRCH3-219ENST00000494069 RNASEH2BQ5TBB1 312 aaKnown RBP8.18□□□□□ -1.1
LRCH3-219ENST00000494069 MRPL14Q6P1L8 145 aaKnown RBP8.18□□□□□ -1.1
LRCH3-219ENST00000494069 FBXO42Q6P3S6 717 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 TLDC1Q6P9B6 456 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 TTC23LQ6PF05 361 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 CYHR1Q6ZMK1 362 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 SHISA6Q6ZSJ9 500 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 COX15Q7KZN9 410 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 PPP1R32Q7Z5V6 425 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 MRGPREQ86SM8 312 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 IGDCC3Q8IVU1 814 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 OR4N4Q8N0Y3 316 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 PPFIBP2Q8ND30 876 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 OR2L3Q8NG85 312 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 OR9A1PQ8NGU1 263 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 PROKR1Q8TCW9 393 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 ACTRT1Q8TDG2 376 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 MIB2Q96AX9 1013 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 SLC22A18Q96BI1 424 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 PWWP2AQ96N64 755 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 ZNF285Q96NJ3 590 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 PKP4Q99569 1192 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 DPH2Q9BQC3 489 aaPredicted RBP8.18□□□□□ -1.1
LRCH3-219ENST00000494069 MESP1Q9BRJ9 268 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 NDC1Q9BTX1 674 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 DHRS4Q9BTZ2 278 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 DDX47Q9H0S4 455 aaKnown RBP8.18□□□□□ -1.1
LRCH3-219ENST00000494069 SLC6A20Q9NP91 592 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 C20orf96Q9NUD7 363 aaPredicted RBP8.18□□□□□ -1.1
LRCH3-219ENST00000494069 SLC17A6Q9P2U8 582 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 NDOR1Q9UHB4 597 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 GPN3Q9UHW5 284 aaPredicted RBP8.18□□□□□ -1.1
LRCH3-219ENST00000494069 SNX12Q9UMY4 172 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 PCDHGA9Q9Y5G4 932 aaKnown RBP8.18□□□□□ -1.1
LRCH3-219ENST00000494069 MAD1L1Q9Y6D9 718 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 MAU2Q9Y6X3 613 aa8.18□□□□□ -1.1
LRCH3-219ENST00000494069 IGKV1-8A0A0C4DH67 115 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 MAGEB16A2A368 324 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 TARM1B6A8C7 271 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 E5RI56 91 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 MYO1CO00159 1063 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 PSIP1O75475 530 aaKnown RBP8.17□□□□□ -1.1
LRCH3-219ENST00000494069 USP1O94782 785 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 EIF2S1P05198 315 aaKnown RBP8.17□□□□□ -1.1
LRCH3-219ENST00000494069 ERVK-10P10266 1014 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 ERGP11308 486 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 ATP5DP30049 168 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 CCNFP41002 786 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 FOLR3P41439 243 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 UQCRFS1P47985 274 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 FNTAP49354 379 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 PGGT1BP53609 377 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 SNRPNP63162 240 aaKnown RBP8.17□□□□□ -1.1
LRCH3-219ENST00000494069 TIAL1Q01085 375 aaKnown RBP eCLIP8.17□□□□□ -1.1
LRCH3-219ENST00000494069 DHX9Q08211 1270 aaKnown RBP8.17□□□□□ -1.1
LRCH3-219ENST00000494069 TSTA3Q13630 321 aaPredicted RBP8.17□□□□□ -1.1
LRCH3-219ENST00000494069 SSPNQ14714 243 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 LONRF1Q17RB8 773 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 MSS51Q4VC12 460 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 PRR30Q53SZ7 412 aaPredicted RBP8.17□□□□□ -1.1
LRCH3-219ENST00000494069 HSP90AA5PQ58FG0 334 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 ZC3H12BQ5HYM0 836 aaKnown RBP8.17□□□□□ -1.1
LRCH3-219ENST00000494069 WASHC2DQ5SRD0 308 aa8.17□□□□□ -1.1
LRCH3-219ENST00000494069 HP1BP3Q5SSJ5 553 aaPredicted RBP8.17□□□□□ -1.1
LRCH3-219ENST00000494069 PAPD7Q5XG87 772 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms