RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 PCBP2Q15366 365 aaKnown RBP eCLIP14.42□□□□□ -0.1
ACTB-213ENST00000493945 SF1Q15637 639 aaKnown RBP14.42□□□□□ -0.1
ACTB-213ENST00000493945 PTCHD3Q3KNS1 767 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 CCSMST1Q4G0I0 132 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 SPESP1Q6UW49 350 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 RBM44Q6ZP01 1051 aaKnown RBP14.42□□□□□ -0.1
ACTB-213ENST00000493945 CDHR3Q6ZTQ4 885 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 TAX1BP1Q86VP1 789 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 KMT5CQ86Y97 462 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 NUDCD3Q8IVD9 361 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 KLHDC8AQ8IYD2 350 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 SNX31Q8N9S9 440 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 DEFB124Q8NES8 71 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 ATP6V1E2Q96A05 226 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 GRAMD1AQ96CP6 724 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 PHF21BQ96EK2 531 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 TMEM74Q96NL1 305 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 IL17FQ96PD4 163 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 PAIP2Q9BPZ3 127 aaKnown RBP14.42□□□□□ -0.1
ACTB-213ENST00000493945 TRMOQ9BU70 441 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 ERVK-6Q9BXR3 956 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 DRC3Q9H069 523 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 ATG10Q9H0Y0 220 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 MRPS30Q9NP92 439 aaKnown RBP14.42□□□□□ -0.1
ACTB-213ENST00000493945 TAC3Q9UHF0 121 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 IKZF3Q9UKT9 509 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 POMT2Q9UKY4 750 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 U3KQA8 63 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 UNC13CQ8NB66 2214 aa14.42□□□□□ -0.1
ACTB-213ENST00000493945 RP1P56715 2156 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 MN1Q10571 1320 aaPredicted RBP14.41□□□□□ -0.1
ACTB-213ENST00000493945 LAMA1P25391 3075 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 A0A0J9YY10 115 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 FOXO6A8MYZ6 492 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 HGSO14964 777 aaPredicted RBP14.41□□□□□ -0.1
ACTB-213ENST00000493945 CAPN5O15484 640 aaPredicted RBP14.41□□□□□ -0.1
ACTB-213ENST00000493945 MLYCDO95822 493 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 EEF1DP29692 281 aaKnown RBP14.41□□□□□ -0.1
ACTB-213ENST00000493945 GMPRP36959 345 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 PLA2G5P39877 138 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 SERPINB4P48594 390 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 HSPA7P48741 367 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 TRA2AQ13595 282 aaKnown RBP eCLIP14.41□□□□□ -0.1
ACTB-213ENST00000493945 PAGE2BQ5JRK9 111 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 PERM1Q5SV97 790 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 TMTC4Q5T4D3 741 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 TMEM71Q6P5X7 295 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 MBOAT1Q6ZNC8 495 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 THOC6Q86W42 341 aaKnown RBP14.41□□□□□ -0.1
ACTB-213ENST00000493945 SFTPA2Q8IWL1 248 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 ADGRF3Q8IZF5 1079 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 OR4D9Q8NGE8 314 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 RAB3IL1Q8TBN0 382 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 DENND1AQ8TEH3 1009 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 RSC1A1Q92681 617 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 ZBTB9Q96C00 473 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 L3HYPDHQ96EM0 354 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 MENTQ9BUN1 341 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 SGPP1Q9BX95 441 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 STRADBQ9C0K7 418 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 EML4Q9HC35 981 aaKnown RBP14.41□□□□□ -0.1
ACTB-213ENST00000493945 PRM3Q9NNZ6 103 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 C1GALT1Q9NS00 363 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 ABCF3Q9NUQ8 709 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 OXSMQ9NWU1 459 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 SLC17A7Q9P2U7 560 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 CIDEBQ9UHD4 219 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 EMCNQ9ULC0 261 aa14.41□□□□□ -0.1
ACTB-213ENST00000493945 PRAMEF33A0A0G2JMD5 474 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 TARM1B6A8C7 271 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 D6RAR5 112 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 BTN3A3O00478 584 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 SUPT7LO94864 414 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 OTCP00480 354 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 MTHFD2P13995 350 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 UGT2B7P16662 529 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 IMPDH1P20839 514 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 GRK2P25098 689 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 SLC6A12P48065 614 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 CCL7P80098 99 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 LAPTM5Q13571 262 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 HIST2H2ACQ16777 129 aaPredicted RBP14.4□□□□□ -0.1
ACTB-213ENST00000493945 CCDC157Q569K6 752 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 ICE2Q659A1 982 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 ATG16L1Q676U5 607 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 HIST2H2AA3Q6FI13 130 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 SUSD1Q6UWL2 747 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 PRSS42Q7Z5A4 293 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 ADCK2Q7Z695 626 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 KRT78Q8N1N4 520 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 AFAP1L2Q8N4X5 818 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 LMNTD1Q8N9Z9 388 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 FAM76AQ8TAV0 307 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 SLC5A11Q8WWX8 675 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 JPH3Q8WXH2 748 aaPredicted RBP14.4□□□□□ -0.1
ACTB-213ENST00000493945 N4BP2L2Q92802 583 aaPredicted RBP14.4□□□□□ -0.1
ACTB-213ENST00000493945 UBE2E3Q969T4 207 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 TGM7Q96PF1 710 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 DEPDC7Q96QD5 511 aa14.4□□□□□ -0.1
ACTB-213ENST00000493945 C1QTNF3Q9BXJ4 246 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms