RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 NUP54Q7Z3B4 507 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 RTN4RL2Q86UN3 420 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 TDRD5Q8NAT2 981 aaKnown RBP3.67□□□□□ -1.82
ITGB1-216ENST00000493758 XXYLT1Q8NBI6 393 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 POGLUT1Q8NBL1 392 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 PRSS33Q8NF86 280 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 KBTBD8Q8NFY9 601 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 OR1L3Q8NH93 324 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 MAGED4Q96JG8 741 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 URM1Q9BTM9 101 aaKnown RBP3.67□□□□□ -1.82
ITGB1-216ENST00000493758 CDK19Q9BWU1 502 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 KLHL4Q9C0H6 718 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 CHST11Q9NPF2 352 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 MAN2C1Q9NTJ4 1040 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 TRPV2Q9Y5S1 764 aa3.67□□□□□ -1.82
ITGB1-216ENST00000493758 NOTCH3Q9UM47 2321 aa3.66□□□□□ -1.82
ITGB1-216ENST00000493758 H0YAE9 185 aa3.66□□□□□ -1.82
ITGB1-216ENST00000493758 TAF6P49848 677 aa3.66□□□□□ -1.82
ITGB1-216ENST00000493758 CYCSP99999 105 aaKnown RBP3.66□□□□□ -1.82
ITGB1-216ENST00000493758 SP3Q02447 781 aa3.66□□□□□ -1.82
ITGB1-216ENST00000493758 NPTX1Q15818 432 aa3.66□□□□□ -1.82
ITGB1-216ENST00000493758 UGP2Q16851 508 aa3.66□□□□□ -1.82
ITGB1-216ENST00000493758 BMP2KLQ5H9B9 411 aa3.66□□□□□ -1.82
ITGB1-216ENST00000493758 ARHGAP22Q7Z5H3 698 aa3.66□□□□□ -1.82
ITGB1-216ENST00000493758 EID3Q8N140 333 aa3.66□□□□□ -1.82
ITGB1-216ENST00000493758 NDUFAF2Q8N183 169 aa3.66□□□□□ -1.82
ITGB1-216ENST00000493758 THAP8Q8NA92 274 aa3.66□□□□□ -1.82
ITGB1-216ENST00000493758 C4orf45Q96LM5 186 aa3.66□□□□□ -1.82
ITGB1-216ENST00000493758 CFAP57Q96MR6 1250 aa3.66□□□□□ -1.82
ITGB1-216ENST00000493758 USP28Q96RU2 1077 aa3.66□□□□□ -1.82
ITGB1-216ENST00000493758 ATOH8Q96SQ7 321 aa3.66□□□□□ -1.82
ITGB1-216ENST00000493758 GOLPH3LQ9H4A5 285 aa3.66□□□□□ -1.82
ITGB1-216ENST00000493758 EDDM13A0A1B0GTR0 161 aa3.65□□□□□ -1.83
ITGB1-216ENST00000493758 NXPH2O95156 264 aa3.65□□□□□ -1.83
ITGB1-216ENST00000493758 CSN3P07498 182 aa3.65□□□□□ -1.83
ITGB1-216ENST00000493758 SAGP10523 405 aaPredicted RBP3.65□□□□□ -1.83
ITGB1-216ENST00000493758 CYP2A7P20853 494 aa3.65□□□□□ -1.83
ITGB1-216ENST00000493758 CSTF2P33240 577 aaKnown RBP eCLIP3.65□□□□□ -1.83
ITGB1-216ENST00000493758 PCGF2P35227 344 aa3.65□□□□□ -1.83
ITGB1-216ENST00000493758 CSE1LP55060 971 aaKnown RBP3.65□□□□□ -1.83
ITGB1-216ENST00000493758 PHKG1Q16816 387 aa3.65□□□□□ -1.83
ITGB1-216ENST00000493758 TMEM207Q6UWW9 146 aa3.65□□□□□ -1.83
ITGB1-216ENST00000493758 LEKR1Q6ZMV7 388 aa3.65□□□□□ -1.83
ITGB1-216ENST00000493758 IL17RELQ6ZVW7 336 aa3.65□□□□□ -1.83
ITGB1-216ENST00000493758 CENPVQ7Z7K6 275 aaPredicted RBP3.65□□□□□ -1.83
ITGB1-216ENST00000493758 CDK20Q8IZL9 346 aa3.65□□□□□ -1.83
ITGB1-216ENST00000493758 SMAP2Q8WU79 429 aaPredicted RBP3.65□□□□□ -1.83
ITGB1-216ENST00000493758 TEKT4Q8WW24 435 aa3.65□□□□□ -1.83
ITGB1-216ENST00000493758 PIGBQ92521 554 aa3.65□□□□□ -1.83
ITGB1-216ENST00000493758 EGFL8Q99944 293 aa3.65□□□□□ -1.83
ITGB1-216ENST00000493758 PYGO2Q9BRQ0 406 aa3.65□□□□□ -1.83
ITGB1-216ENST00000493758 CNOT10Q9H9A5 744 aaKnown RBP3.65□□□□□ -1.83
ITGB1-216ENST00000493758 PPANQ9NQ55 473 aaKnown RBP3.65□□□□□ -1.83
ITGB1-216ENST00000493758 SLC24A2Q9UI40 661 aa3.65□□□□□ -1.83
ITGB1-216ENST00000493758 PPP2R2CQ9Y2T4 447 aa3.65□□□□□ -1.83
ITGB1-216ENST00000493758 A0A1W2PPK0 400 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 MEX3AA1L020 520 aaKnown RBP3.64□□□□□ -1.83
ITGB1-216ENST00000493758 KPNA7A9QM74 516 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 CLDN4O14493 209 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 ATP5BP06576 529 aaKnown RBP3.64□□□□□ -1.83
ITGB1-216ENST00000493758 SMIM18P0DKX4 95 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 IRF2P14316 349 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 CD22P20273 847 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 UGT1A4P22310 534 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 EEF1B2P24534 225 aaKnown RBP3.64□□□□□ -1.83
ITGB1-216ENST00000493758 NKX2-1P43699 371 aaPredicted RBP3.64□□□□□ -1.83
ITGB1-216ENST00000493758 RPL21P46778 160 aaKnown RBP3.64□□□□□ -1.83
ITGB1-216ENST00000493758 VAMP7P51809 220 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 MAPK12P53778 367 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 PAX9P55771 341 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 LMO4P61968 165 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 EFTUD2Q15029 972 aaKnown RBP eCLIP3.64□□□□□ -1.83
ITGB1-216ENST00000493758 MCMDC2Q4G0Z9 681 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 ARMC4Q5T2S8 1044 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 WLSQ5T9L3 541 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 LCN1P1Q5VSP4 162 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 NAA16Q6N069 864 aaPredicted RBP3.64□□□□□ -1.83
ITGB1-216ENST00000493758 Q6ZRP5 223 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 BTN2A1Q7KYR7 527 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 DET1Q7L5Y6 550 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 TTC30BQ8N4P2 665 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 OR10Q1Q8NGQ4 319 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 APOBEC4Q8WW27 367 aaKnown RBP3.64□□□□□ -1.83
ITGB1-216ENST00000493758 SLCO2A1Q92959 643 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 ZNF300Q96RE9 604 aaPredicted RBP3.64□□□□□ -1.83
ITGB1-216ENST00000493758 FEVQ99581 238 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 MAP3K3Q99759 626 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 CPNE1Q99829 537 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 CABLES2Q9BTV7 478 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 TLE6Q9H808 572 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 CDH20Q9HBT6 801 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 PAK5Q9P286 719 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 PPP1R3CQ9UQK1 317 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 WDR83OSQ9Y284 106 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 TMED3Q9Y3Q3 217 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 RPS6KL1Q9Y6S9 549 aa3.64□□□□□ -1.83
ITGB1-216ENST00000493758 COL5A2P05997 1499 aaPredicted RBP3.63□□□□□ -1.83
ITGB1-216ENST00000493758 IGKV3D-20A0A0C4DH25 116 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 MPTX1A8MV57 137 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 EPHB6O15197 1021 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms