RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 DTD1Q8TEA8 209 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 APBB2Q92870 758 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 AP2M1Q96CW1 435 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 CMSS1Q9BQ75 279 aaKnown RBP6.7□□□□□ -1.34
VPS13B-205ENST00000493587 WDR83Q9BRX9 315 aaKnown RBP6.7□□□□□ -1.34
VPS13B-205ENST00000493587 PTDSS2Q9BVG9 487 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 SHARPINQ9H0F6 387 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 PCIF1Q9H4Z3 704 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 BABAM2Q9NXR7 383 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 MPP6Q9NZW5 540 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 CLCA2Q9UQC9 943 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 RNF6Q9Y252 685 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 ZNF638Q14966 1978 aaKnown RBP6.7□□□□□ -1.34
VPS13B-205ENST00000493587 A0A1W2PP18 115 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 KHNYNO15037 678 aaKnown RBP6.7□□□□□ -1.34
VPS13B-205ENST00000493587 TREHO43280 583 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 SNX4O95219 450 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 IFNA4P05014 189 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 CAPN3P20807 821 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 ATP5C1P36542 298 aaKnown RBP6.7□□□□□ -1.34
VPS13B-205ENST00000493587 RFX2P48378 723 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 RBP5P82980 135 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 HOXC5Q00444 222 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 FMO1Q01740 532 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 POU4F2Q12837 409 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 SPP2Q13103 211 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 TCEAL1Q15170 157 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 TIGD3Q6B0B8 471 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 TMEM88Q6PEY1 159 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 TRMT10BQ6PF06 316 aaKnown RBP6.7□□□□□ -1.34
VPS13B-205ENST00000493587 TBPL2Q6SJ96 375 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 RTL4Q6ZR62 310 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 FAM183BPQ6ZVS7 135 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 ABI1Q8IZP0 508 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 CARFQ8N187 725 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 C9orf62Q8N4C0 152 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 S100PBPQ96BU1 408 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 CPB2Q96IY4 423 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 COQ10AQ96MF6 247 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 DPYSL5Q9BPU6 564 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 LMAN2LQ9H0V9 348 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 OR51M1Q9H341 326 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 BCAS3Q9H6U6 928 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 UCK1Q9HA47 277 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 GALNT9Q9HCQ5 603 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 ABCB8Q9NUT2 735 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 NLKQ9UBE8 527 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 FBXL21Q9UKT6 434 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 CHD5Q8TDI0 1954 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 UBDO15205 165 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 GPR37O15354 613 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 ORC5O43913 435 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 NPHS1O60500 1241 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 ACAA1P09110 424 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-205ENST00000493587 TSHRP16473 764 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 LBPP18428 481 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 TSPAN8P19075 237 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 TFEBP19484 476 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 ARRB2P32121 409 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 ADRA1BP35368 520 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 CAP2P40123 477 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 ASMTP46597 345 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 ALDH3A2P51648 485 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 STX4Q12846 297 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 KCNAB2Q13303 367 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 DGKZQ13574 1117 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 RBMS2Q15434 407 aaKnown RBP6.7□□□□□ -1.34
VPS13B-205ENST00000493587 COL28A1Q2UY09 1125 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 SOWAHCQ53LP3 525 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-205ENST00000493587 AADACL4Q5VUY2 407 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 SLC25A25Q6KCM7 469 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 MZT2BQ6NZ67 158 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 POTEGQ6S5H5 508 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 HIPK1Q86Z02 1210 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 DENND1CQ8IV53 801 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 DMRTC2Q8IXT2 367 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-205ENST00000493587 KATNAL2Q8IYT4 538 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 C11orf65Q8NCR3 313 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 PHOSPHO2Q8TCD6 241 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 ELMO3Q96BJ8 720 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 MEGF10Q96KG7 1140 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 SLC25A23Q9BV35 468 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 AP5M1Q9H0R1 490 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 C11orf54Q9H0W9 315 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-205ENST00000493587 RNF167Q9H6Y7 350 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 GLOD4Q9HC38 313 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 ZNF334Q9HCZ1 680 aaPredicted RBP6.7□□□□□ -1.34
VPS13B-205ENST00000493587 ATP13A1Q9HD20 1204 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 ABCB9Q9NP78 766 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 FBXL2Q9UKC9 423 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 DRG1Q9Y295 367 aaKnown RBP6.7□□□□□ -1.34
VPS13B-205ENST00000493587 PCDHGB7Q9Y5F8 929 aa6.7□□□□□ -1.34
VPS13B-205ENST00000493587 PQLC2LA1A4F0 135 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 RHPN2P1A8MT19 583 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 USP17L15C9J2P7 530 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 USP17L13C9JLJ4 530 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 USP17L11C9JVI0 530 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 USP17L18D6R9N7 530 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 USP17L22D6RA61 530 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 USP17L17D6RBQ6 530 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms