RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 CNSTQ6PJW8 725 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 NAPRTQ6XQN6 538 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 RIPOR1Q6ZS17 1223 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 MICALCLQ6ZW33 695 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 SLC22A15Q8IZD6 547 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 OR2L8Q8NGY9 312 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 PSMF1Q92530 271 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 ZUFSPQ96AP4 578 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 C8orf44Q96CB5 159 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 CHP1Q99653 195 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 RAB11FIP5Q9BXF6 653 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 RNF32Q9H0A6 362 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.87■□□□□ 0.299e-7■■■■□ 25.2
NUP50-218ENST00000493456 ABHD10Q9NUJ1 306 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 PLA2G3Q9NZ20 509 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 ITGB1BP2Q9UKP3 347 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 EFR3BQ9Y2G0 817 aa16.87■□□□□ 0.29
NUP50-218ENST00000493456 RASAL1O95294 804 aa16.86■□□□□ 0.29
NUP50-218ENST00000493456 BMP10O95393 424 aa16.86■□□□□ 0.29
NUP50-218ENST00000493456 UQCRHP07919 91 aa16.86■□□□□ 0.29
NUP50-218ENST00000493456 TPM1P09493 284 aa16.86■□□□□ 0.29
NUP50-218ENST00000493456 MYBL2P10244 700 aa16.86■□□□□ 0.29
NUP50-218ENST00000493456 RBP3P10745 1247 aa16.86■□□□□ 0.29
NUP50-218ENST00000493456 COX6A1P12074 109 aa16.86■□□□□ 0.29
NUP50-218ENST00000493456 PSMA3P25788 255 aa16.86■□□□□ 0.29
NUP50-218ENST00000493456 CTNNA2P26232 953 aa16.86■□□□□ 0.29
NUP50-218ENST00000493456 MARCKSL1P49006 195 aa16.86■□□□□ 0.29
NUP50-218ENST00000493456 EIF3EP60228 445 aaKnown RBP16.86■□□□□ 0.29
NUP50-218ENST00000493456 AP2B1P63010 937 aa16.86■□□□□ 0.29
NUP50-218ENST00000493456 SF1Q15637 639 aaKnown RBP16.86■□□□□ 0.29
NUP50-218ENST00000493456 KRTAP21-3Q3LHN1 58 aa16.86■□□□□ 0.29
NUP50-218ENST00000493456 UNC5DQ6UXZ4 953 aa16.86■□□□□ 0.29
NUP50-218ENST00000493456 TAX1BP1Q86VP1 789 aa16.86■□□□□ 0.29
NUP50-218ENST00000493456 SUN3Q8TAQ9 357 aa16.86■□□□□ 0.29
NUP50-218ENST00000493456 MESP1Q9BRJ9 268 aa16.86■□□□□ 0.29
NUP50-218ENST00000493456 GOLPH3Q9H4A6 298 aa16.86■□□□□ 0.29
NUP50-218ENST00000493456 LRRC40Q9H9A6 602 aa16.86■□□□□ 0.29
NUP50-218ENST00000493456 KLK4Q9Y5K2 254 aa16.86■□□□□ 0.29
NUP50-218ENST00000493456 ITPR3Q14573 2671 aa16.85■□□□□ 0.29
NUP50-218ENST00000493456 MTORP42345 2549 aa16.85■□□□□ 0.29
NUP50-218ENST00000493456 IGLV3-12A0A075B6K2 115 aa16.85■□□□□ 0.29
NUP50-218ENST00000493456 HYKKA2RU49 373 aa16.85■□□□□ 0.29
NUP50-218ENST00000493456 RASGRF2O14827 1237 aa16.85■□□□□ 0.29
NUP50-218ENST00000493456 PJA2O43164 708 aa16.85■□□□□ 0.29
NUP50-218ENST00000493456 FOXN2P32314 431 aa16.85■□□□□ 0.29
NUP50-218ENST00000493456 VSX2P58304 361 aaPredicted RBP16.85■□□□□ 0.29
NUP50-218ENST00000493456 POU6F1Q14863 301 aa16.85■□□□□ 0.29
NUP50-218ENST00000493456 WASHC2DQ5SRD0 308 aa16.85■□□□□ 0.29
NUP50-218ENST00000493456 KCTD11Q693B1 232 aa16.85■□□□□ 0.29
NUP50-218ENST00000493456 C11orf63Q6NUN7 778 aa16.85■□□□□ 0.29
NUP50-218ENST00000493456 DARS2Q6PI48 645 aaKnown RBP16.85■□□□□ 0.29
NUP50-218ENST00000493456 PRSS58Q8IYP2 241 aa16.85■□□□□ 0.29
NUP50-218ENST00000493456 C2orf73Q8N5S3 287 aaPredicted RBP16.85■□□□□ 0.29
NUP50-218ENST00000493456 SIRT6Q8N6T7 355 aa16.85■□□□□ 0.29
NUP50-218ENST00000493456 ASZ1Q8WWH4 475 aa16.85■□□□□ 0.29
NUP50-218ENST00000493456 TTC1Q99614 292 aa16.85■□□□□ 0.29
NUP50-218ENST00000493456 TSSK1BQ9BXA7 367 aa16.85■□□□□ 0.29
NUP50-218ENST00000493456 RIC8BQ9NVN3 520 aa16.85■□□□□ 0.29
NUP50-218ENST00000493456 IMPACTQ9P2X3 320 aa16.85■□□□□ 0.29
NUP50-218ENST00000493456 MROH6A6NGR9 719 aa16.84■□□□□ 0.29
NUP50-218ENST00000493456 CTSVO60911 334 aa16.84■□□□□ 0.29
NUP50-218ENST00000493456 WFS1O76024 890 aa16.84■□□□□ 0.29
NUP50-218ENST00000493456 TPH1P17752 444 aa16.84■□□□□ 0.29
NUP50-218ENST00000493456 CAPN3P20807 821 aa16.84■□□□□ 0.29
NUP50-218ENST00000493456 FBLP22087 321 aaKnown RBP16.84■□□□□ 0.29
NUP50-218ENST00000493456 CXCR2P25025 360 aa16.84■□□□□ 0.29
NUP50-218ENST00000493456 MST1P26927 711 aa16.84■□□□□ 0.29
NUP50-218ENST00000493456 SMSP52788 366 aa16.84■□□□□ 0.29
NUP50-218ENST00000493456 CSE1LP55060 971 aaKnown RBP16.84■□□□□ 0.29
NUP50-218ENST00000493456 HSPA14Q0VDF9 509 aa16.84■□□□□ 0.29
NUP50-218ENST00000493456 GRB7Q14451 532 aa16.84■□□□□ 0.29
NUP50-218ENST00000493456 MUM1Q2TAK8 710 aa16.84■□□□□ 0.29
NUP50-218ENST00000493456 SPNS3Q6ZMD2 512 aa16.84■□□□□ 0.29
NUP50-218ENST00000493456 ZNF295-AS1Q8N0V1 137 aa16.84■□□□□ 0.29
NUP50-218ENST00000493456 DTWD1Q8N5C7 304 aa16.84■□□□□ 0.29
NUP50-218ENST00000493456 LMNTD1Q8N9Z9 388 aa16.84■□□□□ 0.29
NUP50-218ENST00000493456 KRT35Q92764 455 aa16.84■□□□□ 0.29
NUP50-218ENST00000493456 SH3BGRL2Q9UJC5 107 aa16.84■□□□□ 0.29
NUP50-218ENST00000493456 SLC39A10Q9ULF5 831 aa16.84■□□□□ 0.29
NUP50-218ENST00000493456 IGHV1-45A0A0A0MS14 117 aa16.83■□□□□ 0.28
NUP50-218ENST00000493456 OR51F1A6NGY5 319 aa16.83■□□□□ 0.28
NUP50-218ENST00000493456 PRPF4O43172 522 aaKnown RBP eCLIP16.83■□□□□ 0.28
NUP50-218ENST00000493456 SLC19A2O60779 497 aa16.83■□□□□ 0.28
NUP50-218ENST00000493456 MFAP3LO75121 409 aa16.83■□□□□ 0.28
NUP50-218ENST00000493456 GPC4O75487 556 aa16.83■□□□□ 0.28
NUP50-218ENST00000493456 MED26O95402 600 aa16.83■□□□□ 0.28
NUP50-218ENST00000493456 WDPCPO95876 746 aa16.83■□□□□ 0.28
NUP50-218ENST00000493456 CCR7P32248 378 aa16.83■□□□□ 0.28
NUP50-218ENST00000493456 PTPN7P35236 360 aa16.83■□□□□ 0.28
NUP50-218ENST00000493456 TESK1Q15569 626 aa16.83■□□□□ 0.28
NUP50-218ENST00000493456 PARP6Q2NL67 630 aa16.83■□□□□ 0.28
NUP50-218ENST00000493456 FRMPD2BQ6IN97 320 aa16.83■□□□□ 0.28
NUP50-218ENST00000493456 HIBCHQ6NVY1 386 aaPredicted RBP16.83■□□□□ 0.28
NUP50-218ENST00000493456 ARHGEF18Q6ZSZ5 1173 aa16.83■□□□□ 0.28
NUP50-218ENST00000493456 RAB42Q8N4Z0 105 aa16.83■□□□□ 0.28
NUP50-218ENST00000493456 IL17FQ96PD4 163 aa16.83■□□□□ 0.28
NUP50-218ENST00000493456 C14orf105Q9NVL8 296 aa16.83■□□□□ 0.28
NUP50-218ENST00000493456 ZC3H7BQ9UGR2 993 aaKnown RBP16.83■□□□□ 0.28
NUP50-218ENST00000493456 CPAMD8Q8IZJ3 1885 aa16.82■□□□□ 0.28
NUP50-218ENST00000493456 CCDC162PA2VCL2 907 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms