RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 PADI4Q9UM07 663 aa13.1□□□□□ -0.31
NUP188-208ENST00000491502 CLCA2Q9UQC9 943 aa13.1□□□□□ -0.31
NUP188-208ENST00000491502 HEBP2Q9Y5Z4 205 aa13.1□□□□□ -0.31
NUP188-208ENST00000491502 U3KQA8 63 aa13.1□□□□□ -0.31
NUP188-208ENST00000491502 BPTFQ12830 3046 aa13.1□□□□□ -0.31
NUP188-208ENST00000491502 TRABD2BA6NFA1 517 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 MATN2O00339 956 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 AZIN1O14977 448 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 CCNT2O60583 730 aaKnown RBP13.09□□□□□ -0.31
NUP188-208ENST00000491502 VPS4BO75351 444 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 SIX3O95343 332 aaPredicted RBP13.09□□□□□ -0.31
NUP188-208ENST00000491502 ESRRBO95718 433 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 MT-CO3P00414 261 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 ENO1P06733 434 aaKnown RBP13.09□□□□□ -0.31
NUP188-208ENST00000491502 CHRNGP07510 517 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 MPSTP25325 297 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 HALP42357 657 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 GNPDA1P46926 289 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 CLCNKAP51800 687 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 INSM1Q01101 510 aaPredicted RBP13.09□□□□□ -0.31
NUP188-208ENST00000491502 TARDBPQ13148 414 aaKnown RBP eCLIP13.09□□□□□ -0.314e-11■■■■■ 41.3
NUP188-208ENST00000491502 CAMK2BQ13554 666 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 GTF2H2Q13888 395 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 NFE2L1Q14494 772 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 PHKG1Q16816 387 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 PLA2G4EQ3MJ16 856 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 PYCR3Q53H96 274 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 METTL21CQ5VZV1 264 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 CES4AQ5XG92 561 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 GTF2H2CQ6P1K8 395 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 OGFOD3Q6PK18 319 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 GPRIN3Q6ZVF9 776 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 CHST15Q7LFX5 561 aaPredicted RBP13.09□□□□□ -0.31
NUP188-208ENST00000491502 TRPM8Q7Z2W7 1104 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 C11orf96Q7Z7L8 435 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 VRK3Q8IV63 474 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 DCUN1D3Q8IWE4 304 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 SLC35F3Q8IY50 421 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 LSMEM2Q8N112 164 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 FAM46DQ8NEK8 389 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 RFWD2Q8NHY2 731 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 MAPK15Q8TD08 544 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 TRPC4APQ8TEL6 797 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 THOC1Q96FV9 657 aaKnown RBP13.09□□□□□ -0.31
NUP188-208ENST00000491502 GSDMCQ9BYG8 508 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 TRIT1Q9H3H1 467 aaKnown RBP13.09□□□□□ -0.31
NUP188-208ENST00000491502 CCDC86Q9H6F5 360 aaKnown RBP13.09□□□□□ -0.31
NUP188-208ENST00000491502 ZNF395Q9H8N7 513 aaPredicted RBP13.09□□□□□ -0.31
NUP188-208ENST00000491502 CARS2Q9HA77 564 aaKnown RBP13.09□□□□□ -0.31
NUP188-208ENST00000491502 MRPL40Q9NQ50 206 aaKnown RBP13.09□□□□□ -0.31
NUP188-208ENST00000491502 KLC4Q9NSK0 619 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 GULP1Q9UBP9 304 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 DKK4Q9UBT3 224 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 POLG2Q9UHN1 485 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 LNPEPQ9UIQ6 1025 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 SUFUQ9UMX1 484 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 ASF1AQ9Y294 204 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 TRAF6Q9Y4K3 522 aa13.09□□□□□ -0.31
NUP188-208ENST00000491502 MAP1BP46821 2468 aaKnown RBP13.08□□□□□ -0.31
NUP188-208ENST00000491502 FAM149AA5PLN7 773 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 CCT8L1PA6NM43 557 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 E2F3O00716 465 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 DIAPH2O60879 1101 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 C1orf105O95561 183 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 CELA2BP08218 269 aaPredicted RBP13.08□□□□□ -0.32
NUP188-208ENST00000491502 UROSP10746 265 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 MYF5P13349 255 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 ACP5P13686 325 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 CCND1P24385 295 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 NDUFS1P28331 727 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 ARL1P40616 181 aaPredicted RBP13.08□□□□□ -0.32
NUP188-208ENST00000491502 CCNG1P51959 295 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 ILF3Q12906 894 aaKnown RBP eCLIP13.08□□□□□ -0.32
NUP188-208ENST00000491502 IFT88Q13099 833 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 TBCCQ15814 346 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 SPDYAQ5MJ70 313 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 CDCP2Q5VXM1 449 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 GUSBP11Q6P575 273 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 YTHDF3Q7Z739 585 aaKnown RBP13.08□□□□□ -0.32
NUP188-208ENST00000491502 RASGRP3Q8IV61 690 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 TEX9Q8N6V9 391 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 DCBLD1Q8N8Z6 715 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 OR9A1PQ8NGU1 263 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 GPBAR1Q8TDU6 330 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 ZCCHC14Q8WYQ9 949 aaKnown RBP13.08□□□□□ -0.32
NUP188-208ENST00000491502 TFGQ92734 400 aaPredicted RBP13.08□□□□□ -0.32
NUP188-208ENST00000491502 DLG3Q92796 817 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 DEPDC7Q96QD5 511 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 CCDC28BQ9BUN5 200 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 RAB11FIP5Q9BXF6 653 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 NRSN2Q9GZP1 204 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 TMEM168Q9H0V1 697 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 OR52A5Q9H2C5 316 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 OSGEPL1Q9H4B0 414 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 MVB12BQ9H7P6 319 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 IPPKQ9H8X2 491 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 SEMA4BQ9NPR2 832 aaPredicted RBP13.08□□□□□ -0.32
NUP188-208ENST00000491502 DNAJC11Q9NVH1 559 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 ZDHHC2Q9UIJ5 367 aa13.08□□□□□ -0.32
NUP188-208ENST00000491502 EPG5Q9HCE0 2579 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms