RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 SUSD1Q6UWL2 747 aa18■□□□□ 0.47
MCF2L-230ENST00000491028 EFL1Q7Z2Z2 1120 aaKnown RBP18■□□□□ 0.47
MCF2L-230ENST00000491028 SPRED1Q7Z699 444 aa18■□□□□ 0.47
MCF2L-230ENST00000491028 OR6Y1Q8NGX8 325 aa18■□□□□ 0.47
MCF2L-230ENST00000491028 IFI44Q8TCB0 444 aa18■□□□□ 0.47
MCF2L-230ENST00000491028 PPP4R1Q8TF05 950 aa18■□□□□ 0.47
MCF2L-230ENST00000491028 RSC1A1Q92681 617 aa18■□□□□ 0.47
MCF2L-230ENST00000491028 TRMOQ9BU70 441 aa18■□□□□ 0.47
MCF2L-230ENST00000491028 GATA5Q9BWX5 397 aaPredicted RBP18■□□□□ 0.47
MCF2L-230ENST00000491028 CAPS2Q9BXY5 557 aa18■□□□□ 0.47
MCF2L-230ENST00000491028 RAB33BQ9H082 229 aa18■□□□□ 0.47
MCF2L-230ENST00000491028 INTS7Q9NVH2 962 aaKnown RBP18■□□□□ 0.47
MCF2L-230ENST00000491028 HRASLS2Q9NWW9 162 aa18■□□□□ 0.47
MCF2L-230ENST00000491028 GPRC5BQ9NZH0 403 aa18■□□□□ 0.47
MCF2L-230ENST00000491028 SLC22A14Q9Y267 594 aa18■□□□□ 0.47
MCF2L-230ENST00000491028 STK38LQ9Y2H1 464 aa18■□□□□ 0.47
MCF2L-230ENST00000491028 ANGPTL3Q9Y5C1 460 aa18■□□□□ 0.47
MCF2L-230ENST00000491028 PCDHB11Q9Y5F2 797 aa18■□□□□ 0.47
MCF2L-230ENST00000491028 LRRC14BA6NHZ5 514 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 NPHS1O60500 1241 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 KATNA1O75449 491 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 GP1BAP07359 652 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 EPB42P16452 691 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 TYRP1P17643 537 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 POLR2CP19387 275 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-230ENST00000491028 GRK2P25098 689 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 ALDH4A1P30038 563 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 PEBP1P30086 187 aaKnown RBP17.99■□□□□ 0.47
MCF2L-230ENST00000491028 ABATP80404 500 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 CDC16Q13042 620 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 TSTA3Q13630 321 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-230ENST00000491028 GTF2H2Q13888 395 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 CHI3L2Q15782 390 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 PERM1Q5SV97 790 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 GTF2H2CQ6P1K8 395 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 FRMD7Q6ZUT3 714 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 GOLGA7Q7Z5G4 137 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 PIP4P1Q86T03 277 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 C2orf73Q8N5S3 287 aaPredicted RBP17.99■□□□□ 0.47
MCF2L-230ENST00000491028 TEX9Q8N6V9 391 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 CCNYL1Q8N7R7 359 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 AHCYL2Q96HN2 611 aaKnown RBP17.99■□□□□ 0.47
MCF2L-230ENST00000491028 CNDP1Q96KN2 507 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 CCDC3Q9BQI4 270 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 GSTO2Q9H4Y5 243 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 SPHK1Q9NYA1 384 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 ACTR10Q9NZ32 417 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 OGFRQ9NZT2 677 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 EPHA6Q9UF33 1036 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 TAC3Q9UHF0 121 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 DYRK1BQ9Y463 629 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 KCNE2Q9Y6J6 123 aa17.99■□□□□ 0.47
MCF2L-230ENST00000491028 ASCC3Q8N3C0 2202 aaKnown RBP17.98■□□□□ 0.47
MCF2L-230ENST00000491028 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.98■□□□□ 0.47
MCF2L-230ENST00000491028 GSAPA4D1B5 854 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 ISM1B1AKI9 464 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 TMEM114B3SHH9 223 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 KLF11O14901 512 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 GFRA3O60609 400 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 SNUPNO95149 360 aaKnown RBP17.98■□□□□ 0.47
MCF2L-230ENST00000491028 MLYCDO95822 493 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 BGNP21810 368 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 OR1D5P58170 312 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 CLCQ05315 142 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 SQSTM1Q13501 440 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 NAA25Q14CX7 972 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 CLPPQ16740 277 aaPredicted RBP17.98■□□□□ 0.47
MCF2L-230ENST00000491028 SLC5A12Q1EHB4 618 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 ATG16L1Q676U5 607 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 C17orf64Q86WR6 236 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 SNX31Q8N9S9 440 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 LMNTD1Q8N9Z9 388 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 OR2A1Q8NGT9 310 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 CKAP2Q8WWK9 683 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 OR4K3Q96R72 315 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 PITPNM3Q9BZ71 974 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 POMT2Q9UKY4 750 aa17.98■□□□□ 0.47
MCF2L-230ENST00000491028 CLGNO14967 610 aa17.97■□□□□ 0.47
MCF2L-230ENST00000491028 B4GAT1O43505 415 aa17.97■□□□□ 0.47
MCF2L-230ENST00000491028 TNFSF14O43557 240 aa17.97■□□□□ 0.47
MCF2L-230ENST00000491028 UGT2B7P16662 529 aa17.97■□□□□ 0.47
MCF2L-230ENST00000491028 NPPBP16860 134 aa17.97■□□□□ 0.47
MCF2L-230ENST00000491028 GNAZP19086 355 aa17.97■□□□□ 0.47
MCF2L-230ENST00000491028 PSMB5P28074 263 aa17.97■□□□□ 0.47
MCF2L-230ENST00000491028 CMPK1P30085 196 aa17.97■□□□□ 0.47
MCF2L-230ENST00000491028 PPM1FP49593 454 aaPredicted RBP17.97■□□□□ 0.47
MCF2L-230ENST00000491028 PRDX1Q06830 199 aaKnown RBP17.97■□□□□ 0.47
MCF2L-230ENST00000491028 PCDH1Q08174 1060 aa17.97■□□□□ 0.47
MCF2L-230ENST00000491028 GALNT1Q10472 559 aaPredicted RBP17.97■□□□□ 0.47
MCF2L-230ENST00000491028 LCP2Q13094 533 aa17.97■□□□□ 0.47
MCF2L-230ENST00000491028 RCN2Q14257 317 aa17.97■□□□□ 0.47
MCF2L-230ENST00000491028 ICE2Q659A1 982 aa17.97■□□□□ 0.47
MCF2L-230ENST00000491028 SPESP1Q6UW49 350 aa17.97■□□□□ 0.47
MCF2L-230ENST00000491028 ZCCHC23Q6ZST2 131 aa17.97■□□□□ 0.47
MCF2L-230ENST00000491028 MTERF4Q7Z6M4 381 aaKnown RBP17.97■□□□□ 0.47
MCF2L-230ENST00000491028 Q8N9G6 341 aaPredicted RBP17.97■□□□□ 0.47
MCF2L-230ENST00000491028 FLVCR1-AS1Q8TAF5 88 aa17.97■□□□□ 0.47
MCF2L-230ENST00000491028 NETO1Q8TDF5 533 aa17.97■□□□□ 0.47
MCF2L-230ENST00000491028 LRRC8CQ8TDW0 803 aa17.97■□□□□ 0.47
MCF2L-230ENST00000491028 MAGEB18Q96M61 343 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms