RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 A0A1W2PRB8 838 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 ZNF726A6NNF4 738 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 DFNA5O60443 496 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 AGXTP21549 392 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 SCRN3Q0VDG4 424 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 SLC13A2Q13183 592 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 CRTC2Q53ET0 693 aaPredicted RBP8.65□□□□□ -1.02
LSAMP-205ENST00000490035 UBXN11Q5T124 520 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 PDE12Q6L8Q7 609 aaKnown RBP8.65□□□□□ -1.02
LSAMP-205ENST00000490035 PSRC1Q6PGN9 363 aaPredicted RBP8.65□□□□□ -1.02
LSAMP-205ENST00000490035 RALGPS2Q86X27 583 aaPredicted RBP8.65□□□□□ -1.02
LSAMP-205ENST00000490035 CEP76Q8TAP6 659 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 HERVK_113Q902F9 699 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 CD180Q99467 661 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 NKIRAS2Q9NYR9 191 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 FAM159BA6NKW6 160 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 ELOA3DA6NLF2 546 aaPredicted RBP8.65□□□□□ -1.02
LSAMP-205ENST00000490035 PPEF2O14830 753 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 CPN2P22792 545 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 CDH12P55289 794 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 DSC2Q02487 901 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 TUBB3Q13509 450 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 NPTX1Q15818 432 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 ELOA3BQ3SY89 546 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 TMEM164Q5U3C3 297 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 UNQ6126/PRO20091Q6UXV3 157 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 ELOA3Q8NG57 546 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 KLHL5Q96PQ7 755 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 B3GNT5Q9BYG0 378 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 BTBD1Q9H0C5 482 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 COL1A1P02452 1464 aaPredicted RBP8.65□□□□□ -1.02
LSAMP-205ENST00000490035 H0YAE9 185 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 ACOX3O15254 700 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 OR1I1O60431 355 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 BANF1O75531 89 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 ENPP2Q13822 863 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 PAFAH1B3Q15102 231 aaKnown RBP8.65□□□□□ -1.02
LSAMP-205ENST00000490035 PLEKHS1Q5SXH7 462 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 OTOP3Q7RTS5 596 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 OR8H1Q8NGG4 311 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 SLC35B2Q8TB61 432 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 COPS5Q92905 334 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 PYURFQ96I23 114 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 IL12RB2Q99665 862 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 ITPAQ9BY32 194 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 BHLHE41Q9C0J9 482 aaPredicted RBP8.65□□□□□ -1.02
LSAMP-205ENST00000490035 ZBTB26Q9HCK0 441 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 CLIC1O00299 241 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 HLA-DPB1P04440 258 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 ZNF20P17024 532 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 ZNF33BQ06732 778 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 SEC23BQ15437 767 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 PM20D2Q8IYS1 436 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 HTRA1Q92743 480 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 C1orf74Q96LT6 269 aa8.65□□□□□ -1.02
LSAMP-205ENST00000490035 PELOQ9BRX2 385 aaKnown RBP8.65□□□□□ -1.02
LSAMP-205ENST00000490035 CHMP1AQ9HD42 196 aaPredicted RBP8.65□□□□□ -1.02
LSAMP-205ENST00000490035 TRNAU1APQ9NX07 287 aaKnown RBP8.65□□□□□ -1.02
LSAMP-205ENST00000490035 IGLV3-22A0A075B6J6 115 aa8.65□□□□□ -1.03
LSAMP-205ENST00000490035 NEMP2A6NFY4 417 aa8.65□□□□□ -1.03
LSAMP-205ENST00000490035 ITGA3P26006 1051 aa8.65□□□□□ -1.03
LSAMP-205ENST00000490035 CCNHP51946 323 aaPredicted RBP8.65□□□□□ -1.03
LSAMP-205ENST00000490035 VWA5B1Q5TIE3 1220 aa8.65□□□□□ -1.03
LSAMP-205ENST00000490035 MFSD3Q96ES6 412 aa8.65□□□□□ -1.03
LSAMP-205ENST00000490035 IFT27Q9BW83 186 aa8.65□□□□□ -1.03
LSAMP-205ENST00000490035 DPAGT1Q9H3H5 408 aa8.65□□□□□ -1.03
LSAMP-205ENST00000490035 TPK1Q9H3S4 243 aa8.65□□□□□ -1.03
LSAMP-205ENST00000490035 SUV39H2Q9H5I1 410 aa8.65□□□□□ -1.03
LSAMP-205ENST00000490035 ZNF670-ZNF695F2Z2N8 137 aa8.65□□□□□ -1.03
LSAMP-205ENST00000490035 SLC2A2P11168 524 aaPredicted RBP8.65□□□□□ -1.03
LSAMP-205ENST00000490035 PCDH19Q8TAB3 1148 aa8.65□□□□□ -1.03
LSAMP-205ENST00000490035 KCNN1Q92952 543 aa8.65□□□□□ -1.03
LSAMP-205ENST00000490035 GPR22Q99680 433 aa8.65□□□□□ -1.03
LSAMP-205ENST00000490035 LPIN3Q9BQK8 851 aa8.65□□□□□ -1.03
LSAMP-205ENST00000490035 ACTR6Q9GZN1 396 aa8.65□□□□□ -1.03
LSAMP-205ENST00000490035 RGS17Q9UGC6 210 aaPredicted RBP8.65□□□□□ -1.03
LSAMP-205ENST00000490035 EVLQ9UI08 416 aaPredicted RBP8.65□□□□□ -1.03
LSAMP-205ENST00000490035 IFT52Q9Y366 437 aa8.65□□□□□ -1.03
LSAMP-205ENST00000490035 PROZP22891 400 aa8.64□□□□□ -1.03
LSAMP-205ENST00000490035 ASPAP45381 313 aa8.64□□□□□ -1.03
LSAMP-205ENST00000490035 DGKGP49619 791 aa8.64□□□□□ -1.03
LSAMP-205ENST00000490035 CRHR2Q13324 411 aa8.64□□□□□ -1.03
LSAMP-205ENST00000490035 ZNF630Q2M218 657 aaPredicted RBP8.64□□□□□ -1.03
LSAMP-205ENST00000490035 PRPF38BQ5VTL8 546 aaKnown RBP8.64□□□□□ -1.03
LSAMP-205ENST00000490035 C3P1Q6ZMU1 363 aa8.64□□□□□ -1.03
LSAMP-205ENST00000490035 OTUB2Q96DC9 234 aa8.64□□□□□ -1.03
LSAMP-205ENST00000490035 S100A16Q96FQ6 103 aaKnown RBP8.64□□□□□ -1.03
LSAMP-205ENST00000490035 FRMD6Q96NE9 622 aa8.64□□□□□ -1.03
LSAMP-205ENST00000490035 TBL1XR1Q9BZK7 514 aa8.64□□□□□ -1.03
LSAMP-205ENST00000490035 ALG5Q9Y673 324 aa8.64□□□□□ -1.03
LSAMP-205ENST00000490035 SLC16A5O15375 505 aa8.64□□□□□ -1.03
LSAMP-205ENST00000490035 DNAJB6O75190 326 aa8.64□□□□□ -1.03
LSAMP-205ENST00000490035 IL3P08700 152 aa8.64□□□□□ -1.03
LSAMP-205ENST00000490035 FLT3LGP49771 235 aa8.64□□□□□ -1.03
LSAMP-205ENST00000490035 SIM2Q14190 667 aaPredicted RBP8.64□□□□□ -1.03
LSAMP-205ENST00000490035 CLEC6AQ6EIG7 209 aa8.64□□□□□ -1.03
LSAMP-205ENST00000490035 ZNF550Q7Z398 422 aa8.64□□□□□ -1.03
LSAMP-205ENST00000490035 FAM46DQ8NEK8 389 aa8.64□□□□□ -1.03
LSAMP-205ENST00000490035 SAMD11Q96NU1 681 aa8.64□□□□□ -1.03
LSAMP-205ENST00000490035 BCL7BQ9BQE9 202 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms