RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 AP1M2Q9Y6Q5 423 aa16.7■□□□□ 0.26
MDC1-206ENST00000489540 E7ENX8 843 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 PIAS1O75925 651 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 KLK3P07288 261 aaPredicted RBP16.69■□□□□ 0.26
MDC1-206ENST00000489540 HBQ1P09105 142 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 LIFP15018 202 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 CMPK1P30085 196 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 GRIA3P42263 894 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 GABRA4P48169 554 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 TAS2R39P59534 338 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 POU4F1Q01851 419 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 TAP2Q03519 686 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 NAB1Q13506 487 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 GRTP1Q5TC63 336 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 FBF1Q8TES7 1133 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 ANKRD7Q92527 254 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 DLG3Q92796 817 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 TSPAN17Q96FV3 270 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 SLC7A5P2Q9GIP4 190 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 POPDC3Q9HBV1 291 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 LHX9Q9NQ69 397 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 ADAMTS6Q9UKP5 1117 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 KLHL20Q9Y2M5 609 aa16.69■□□□□ 0.26
MDC1-206ENST00000489540 ZZEF1O43149 2961 aa16.68■□□□□ 0.26
MDC1-206ENST00000489540 PABPN1LA6NDY0 278 aaKnown RBP16.68■□□□□ 0.26
MDC1-206ENST00000489540 OR2B3O76000 313 aa16.68■□□□□ 0.26
MDC1-206ENST00000489540 CCNDBP1O95273 360 aa16.68■□□□□ 0.26
MDC1-206ENST00000489540 C1QAP02745 245 aa16.68■□□□□ 0.26
MDC1-206ENST00000489540 ZNF37AP17032 561 aaPredicted RBP16.68■□□□□ 0.26
MDC1-206ENST00000489540 SPRP35270 261 aaPredicted RBP16.68■□□□□ 0.26
MDC1-206ENST00000489540 RHDQ02161 417 aa16.68■□□□□ 0.26
MDC1-206ENST00000489540 PRDX1Q06830 199 aaKnown RBP16.68■□□□□ 0.26
MDC1-206ENST00000489540 TSTA3Q13630 321 aaPredicted RBP16.68■□□□□ 0.26
MDC1-206ENST00000489540 KBTBD12Q3ZCT8 623 aa16.68■□□□□ 0.26
MDC1-206ENST00000489540 FCRL6Q6DN72 434 aa16.68■□□□□ 0.26
MDC1-206ENST00000489540 SUSD1Q6UWL2 747 aa16.68■□□□□ 0.26
MDC1-206ENST00000489540 TMEM207Q6UWW9 146 aa16.68■□□□□ 0.26
MDC1-206ENST00000489540 MCATQ8IVS2 390 aaKnown RBP16.68■□□□□ 0.26
MDC1-206ENST00000489540 RNF31Q96EP0 1072 aa16.68■□□□□ 0.26
MDC1-206ENST00000489540 SLC45A3Q96JT2 553 aa16.68■□□□□ 0.26
MDC1-206ENST00000489540 FMO2Q99518 471 aa16.68■□□□□ 0.26
MDC1-206ENST00000489540 RBBP8Q99708 897 aa16.68■□□□□ 0.26
MDC1-206ENST00000489540 ACTR5Q9H9F9 607 aaPredicted RBP16.68■□□□□ 0.26
MDC1-206ENST00000489540 UTP6Q9NYH9 597 aaKnown RBP16.68■□□□□ 0.26
MDC1-206ENST00000489540 EURLQ9NYK6 297 aa16.68■□□□□ 0.26
MDC1-206ENST00000489540 KCND3Q9UK17 655 aa16.68■□□□□ 0.26
MDC1-206ENST00000489540 MTO1Q9Y2Z2 717 aaKnown RBP16.68■□□□□ 0.26
MDC1-206ENST00000489540 PCDHGA4Q9Y5G9 962 aa16.68■□□□□ 0.26
MDC1-206ENST00000489540 PTPRQQ9UMZ3 2332 aa16.67■□□□□ 0.26
MDC1-206ENST00000489540 C21orf140B9A014 251 aa16.67■□□□□ 0.26
MDC1-206ENST00000489540 ZNF749O43361 778 aa16.67■□□□□ 0.26
MDC1-206ENST00000489540 ENO2P09104 434 aaPredicted RBP16.67■□□□□ 0.26
MDC1-206ENST00000489540 PSMB5P28074 263 aa16.67■□□□□ 0.26
MDC1-206ENST00000489540 IMPA1P29218 277 aa16.67■□□□□ 0.26
MDC1-206ENST00000489540 PHBP35232 272 aa16.67■□□□□ 0.26
MDC1-206ENST00000489540 PGGT1BP53609 377 aa16.67■□□□□ 0.26
MDC1-206ENST00000489540 ABATP80404 500 aa16.67■□□□□ 0.26
MDC1-206ENST00000489540 PRAMEF17Q5VTA0 474 aa16.67■□□□□ 0.26
MDC1-206ENST00000489540 TLDC1Q6P9B6 456 aa16.67■□□□□ 0.26
MDC1-206ENST00000489540 IFT20Q8IY31 132 aa16.67■□□□□ 0.26
MDC1-206ENST00000489540 LRRC56Q8IYG6 542 aaPredicted RBP16.67■□□□□ 0.26
MDC1-206ENST00000489540 PPM1NQ8N819 430 aa16.67■□□□□ 0.26
MDC1-206ENST00000489540 CLIP3Q96DZ5 547 aa16.67■□□□□ 0.26
MDC1-206ENST00000489540 ACAT2Q9BWD1 397 aa16.67■□□□□ 0.26
MDC1-206ENST00000489540 FAM117AQ9C073 453 aa16.67■□□□□ 0.26
MDC1-206ENST00000489540 SPRTNQ9H040 489 aaPredicted RBP16.67■□□□□ 0.26
MDC1-206ENST00000489540 GPAMQ9HCL2 828 aa16.67■□□□□ 0.26
MDC1-206ENST00000489540 MRPS30Q9NP92 439 aaKnown RBP16.67■□□□□ 0.26
MDC1-206ENST00000489540 ANKMY1Q9P2S6 941 aa16.67■□□□□ 0.26
MDC1-206ENST00000489540 CROTQ9UKG9 612 aa16.67■□□□□ 0.26
MDC1-206ENST00000489540 NOVA2Q9UNW9 492 aaKnown RBP16.67■□□□□ 0.26
MDC1-206ENST00000489540 SDK2Q58EX2 2172 aa16.67■□□□□ 0.26
MDC1-206ENST00000489540 ZNF891A8MT65 544 aaPredicted RBP16.66■□□□□ 0.26
MDC1-206ENST00000489540 H3BMH7 237 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 MEN1O00255 615 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 HCRTR1O43613 425 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 SRPX2O60687 465 aaPredicted RBP16.66■□□□□ 0.26
MDC1-206ENST00000489540 WT1P19544 449 aaPredicted RBP16.66■□□□□ 0.26
MDC1-206ENST00000489540 TCN2P20062 427 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 DLSTP36957 453 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 AP1S2P56377 157 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 MC1RQ01726 317 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 USP10Q14694 798 aaKnown RBP16.66■□□□□ 0.26
MDC1-206ENST00000489540 DEFB110Q30KQ9 67 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 ICE2Q659A1 982 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 CEP97Q8IW35 865 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 SLC38A9Q8NBW4 561 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 PPFIBP2Q8ND30 876 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 GPR22Q99680 433 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 DPH2Q9BQC3 489 aaPredicted RBP16.66■□□□□ 0.26
MDC1-206ENST00000489540 DPH7Q9BTV6 452 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 GPR87Q9BY21 358 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 PCBD2Q9H0N5 130 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 IRAK4Q9NWZ3 460 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 STOX2Q9P2F5 926 aaPredicted RBP16.66■□□□□ 0.26
MDC1-206ENST00000489540 TAC3Q9UHF0 121 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 SNX7Q9UNH6 387 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 ADAMTS20P59510 1910 aa16.66■□□□□ 0.26
MDC1-206ENST00000489540 TERTO14746 1132 aaKnown RBP16.65■□□□□ 0.26
MDC1-206ENST00000489540 ZSCAN9O15535 394 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms